Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0467 |
Symbol | |
ID | 6363734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 556701 |
End bp | 559292 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642679624 |
Product | superfamily II RNA helicase |
Protein accession | YP_001954411 |
Protein GI | 189439330 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTC ACCAACACCA TAAGGGCAAT GCCGATTCCC AGACGCTGAG CCCTTCGCAG CGGTACGCAT CATTCCAAAA AGTCCAGCGC CATCGGGCGT CCGCAGCAGC GCGATTCGCC GAATCCCTGC CCTTCGAACT GGACGACTTC CAGACCGAAG CCAATGACGC GCTCGAAGCC GGCAGCAACG TACTGGTCGC GGCCCCAACC GGTGCCGGCA AAACCGTAGT GGCGGATTTT GCCATTTATC TCGCCCAGGA ACGCAACGTC AAAGCCTTCT ATACCACACC GATCAAAGCG CTGAGCAATC AGAAATACCA TGATCTGGTC GACGTGTACG GCCCGGACAA GGTAGGCCTG CTCACCGGCG ACACCTCGAT CAACTCCGAG GCGGACATCG TGGTCATGAC CACCGAAGTG CTGCGCAACA TGCTCTACGA GCGTTCCACC ACGCTGAACG CACTGCGCTA CGTGATTCTC GACGAAGTGC ACTATCTGGC CGACCGGTTC CGCGGGCCCG TGTGGGAGGA AGTCATCATC CACCTGCCCA AGACGGTCAA GATCGTCGGC CTGTCCGCTA CCGTGTCCAA CGTGGAGGAT TTCTCCAACT GGATTGCCTC GGTGCGAGGC GACACCAAAC TGGTGATCAG CGAACACCGC CCCGTGCCTT TGGAACAGCA CGTCATCGTG CAGGCGGACG AACACACCGA GCCTGAGGTG CTGGATCTCT ATCGCCGCGA CGGCAACGGC GAGCAGACCA CCAAGCTCAA CGCCGAACTC ATCAACCGGC TCGACCAGTT GGACCGCAAG GCCGCACGCC GGCGCGGCGA GGAACGCCCC GATAAGCGCA AGGGCTTCGG CAGAGGCCGC GGCGGCAAAG GCGCCAAGGG CCATGCCCCG AAAGCGGAAC GCCACACCCC GCGCCGCTGG GCCGTGGTGG ACGAGCTTAA CTTTCTGGGA ATGTTGCCCG GCATCTACTT CATCTTCTCG CGCAACGGTT GTGACCAGGC CGTGGAACAG TGTATCAACG CTGGACTGGA GCTCACCACC GATGAGGAAG TGACCAAGAT TCGCCGCATC GTGGATGAGA TGGTGGAGGG GCAACTCACT CAGGAAGACC TGAAAGCCCT GCAGTTCTCC AAGTTCCGCT TTGCGTTGGA AGAAGGCTTC GCTTCGCATC ATGCCGGCAT GATTGCCCTG TTCCGCCAGA TAGTCGAACG ATTGTTCGAA GAAGGTCTGG TCAAAATGGT GTTCGCCACG GAAACACTGG CCTTGGGCAT CAATATGCCG GCCCGCTGCG TGGTGGTAGA GAAACTCGAG AAGTTCGACG GTACCGGTCA TGTGGGCCTG ACGCCCGGCG AATTCACGCA GCTCACCGGT CGTGCCGGTC GGCGCGGCAT CGACACCATC GGCCACGCCA TCGTGGTTGA CCATCACGGT TTTGTGCCCG CCACGGCCGC CGCGCTGTCA TCCAAGCGTG TCTACCCGCT GCACTCGAGC TTCCGCCCCA CGTTCAACAT GGCCGTGAAC CTGCTCAACT CCAGCGACTA CGAGACCGCG CACGTTACCC TGGACCAGTC GTTTGCCCAG TGGGAGGCCA ACGAATCGGC CTGGCAGCTG GAATCGCAGA TCAACACACT GAAGAACGCG CTGGCCGGAT ACGAACAGGC GTTCGCATGC GAACACGGCG ACTTCAAACA GTTCATGACC CTGCGTATGG AGCTGAGCGA CATCGAAAAG GAAGGCCGCC GCAAACTGAA GCACGAAGTG TTCCTGACCG ATCAGGAGCG TTCACGCGCC TTCCAGAACC TTGACCAGCG CATTCGCGAT TTGCGCAAGG CGGAGCACGA GCATCCATGC CGCAACTGCC CGGACCTCCA GCAACACCTC AAGTGGGGCC ACCGCTGGGC CCGCGAGACC CGCGAACTGC AGCGCGTCAC CGATCGCTAC GACTCCCGTA CCGGGTCCGT GGCCCGTCAG TTCGATCGCA TCTGCGATAT TCTCACCGGG CTTGGTTACC TCGAACGTCA TGTCAATGCG GCCGGCCACA TTGACATGAC GTTGACCGAA AAAGGCTCGC TGCTGCGCCG CATCTACAGT GAACATGACC TGGAACTGTG CGAGGCGCTG CTCGCCGGCA CGTTCGACAA GCTCGACGCC AACGGACTGG CCGCTGTGCT CTCTTCACTG GTATACGAGG CCAGACGCGG GGGAGACGGC GAACCGAGGC ACTACCCGGG CGGCATCTCC GGGTCCATCG CAATCGCTTC GTCCAAGCTC AAGGGCATCT GTGAAGACAT CGATATCCTG TGCGAGGATC ACGGTCTGGA CGAGATGCAG CGGCCGGACT TCGGCATTCT CGACATCATG TATGAATGGG CGGATGGCGG TTCGCTGGGA TCGTGCCTGT ACGGCACCGA CATGACCGGC GGCGACTTCG TGCGCACTGC CAAACGACTG GCTGACGTGC TGCAGCAGAT CGCTGTCGCC CAGCCGCTGC CGTTCGACGG GGGAGAGCGG CTGGCAGGCC TCGCCCACGA AGCGGCCGAC CGGGTCAATC GTGGCGTGGT GGCCTACTCC GGCGTGGACT GA
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Protein sequence | MARHQHHKGN ADSQTLSPSQ RYASFQKVQR HRASAAARFA ESLPFELDDF QTEANDALEA GSNVLVAAPT GAGKTVVADF AIYLAQERNV KAFYTTPIKA LSNQKYHDLV DVYGPDKVGL LTGDTSINSE ADIVVMTTEV LRNMLYERST TLNALRYVIL DEVHYLADRF RGPVWEEVII HLPKTVKIVG LSATVSNVED FSNWIASVRG DTKLVISEHR PVPLEQHVIV QADEHTEPEV LDLYRRDGNG EQTTKLNAEL INRLDQLDRK AARRRGEERP DKRKGFGRGR GGKGAKGHAP KAERHTPRRW AVVDELNFLG MLPGIYFIFS RNGCDQAVEQ CINAGLELTT DEEVTKIRRI VDEMVEGQLT QEDLKALQFS KFRFALEEGF ASHHAGMIAL FRQIVERLFE EGLVKMVFAT ETLALGINMP ARCVVVEKLE KFDGTGHVGL TPGEFTQLTG RAGRRGIDTI GHAIVVDHHG FVPATAAALS SKRVYPLHSS FRPTFNMAVN LLNSSDYETA HVTLDQSFAQ WEANESAWQL ESQINTLKNA LAGYEQAFAC EHGDFKQFMT LRMELSDIEK EGRRKLKHEV FLTDQERSRA FQNLDQRIRD LRKAEHEHPC RNCPDLQQHL KWGHRWARET RELQRVTDRY DSRTGSVARQ FDRICDILTG LGYLERHVNA AGHIDMTLTE KGSLLRRIYS EHDLELCEAL LAGTFDKLDA NGLAAVLSSL VYEARRGGDG EPRHYPGGIS GSIAIASSKL KGICEDIDIL CEDHGLDEMQ RPDFGILDIM YEWADGGSLG SCLYGTDMTG GDFVRTAKRL ADVLQQIAVA QPLPFDGGER LAGLAHEAAD RVNRGVVAYS GVD
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