| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0356 |
|---|
| Symbol | dcm1 |
|---|
| ID | 6364590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 431424 |
|---|
| End bp | 432395 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642679506 |
|---|
| Product | site-specific DNA methylase |
|---|
| Protein accession | YP_001954300 |
|---|
| Protein GI | 189439219 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA TCAGGATAGC GGATTTGTTC GCCGGCATCG GCGGCATCCG CATGGGAATG
GTGCAGGCGC TGGGCGATGC CGCGCACGTG GTGTATTCGT CCGAGTGGAA CAAGTACAGC
GTGCAGACCT ATGAGGCGAA CTGGCACGAC GAGAATCCCG TGGCCGGCGA CATCACCAAG
GTCGACGAGC ATGACGTTCC CGACATCGAC CTGCTGCTCG CGGGATTCCC GTGCCAGCCG
TTCTCCATCG CCGGCGTCTC CAAGAAACAG AGCATGGGCC GTCCCACCGG CTTCGAGGAC
AAGACCCAAG GCACACTGTT CTTCGACGTG GCGAGAATCA TCAAGGCGAA GCAGCCGAAG
GCGTTCCTCC TGGAGAACGT GAAGAACCTG CTCTCGCACG ACCGTGGGCG CACGTTCAAG
ACGATATATT CCGTGCTGAC CGAAGACCTT GGATACCACG TCACCTACAA GCTGATCGAC
GCGGCGGGCT TCGTCCCCCA GCACAGGGAA CGCACGTACA TCGTGGGCTT TCGCGAGGAG
AACGGGTTCA CGTTCGATGA CGTGAAGCCC ATCGCGCACG GCAACGTCGG CAGCATCCTC
CTGCCCGCCT CCCAGGTTCC CGACAAGTAT GTTCTGAGCG ACAAGCTGTG GACGTACCTC
CAGAACTACA AGAAGAAGCA CGAGGCCGCA GGCAACGGTT TCGGATATGG CATGGTCGAT
GCCGCCACCG ACCACACGCG CACGTTGAGC GCGCGGTACG GAAAGGACGG CAGCGAGATA
CTGGTCTCAC GCGGCGAGGG AAAGAACCCT CGAAGGCTAA CCCCGCGCGA ATGCGCGCGA
CTGATGGGCT ACCCGGATTC GTTCAGTATC CCGGTATCAG ACACGCAGGC ATACCGGCAG
TTCGGCAACT CGGTCGCAGT GCCGGTCATC CGAGCCATAG GCGAGGCGAT GAGACCCTAC
CTGTCCGACT GA
|
|---|
| Protein sequence | MSEIRIADLF AGIGGIRMGM VQALGDAAHV VYSSEWNKYS VQTYEANWHD ENPVAGDITK
VDEHDVPDID LLLAGFPCQP FSIAGVSKKQ SMGRPTGFED KTQGTLFFDV ARIIKAKQPK
AFLLENVKNL LSHDRGRTFK TIYSVLTEDL GYHVTYKLID AAGFVPQHRE RTYIVGFREE
NGFTFDDVKP IAHGNVGSIL LPASQVPDKY VLSDKLWTYL QNYKKKHEAA GNGFGYGMVD
AATDHTRTLS ARYGKDGSEI LVSRGEGKNP RRLTPRECAR LMGYPDSFSI PVSDTQAYRQ
FGNSVAVPVI RAIGEAMRPY LSD
|
|---|
| |