| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0299 |
|---|
| Symbol | fucP3 |
|---|
| ID | 6363386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 372207 |
|---|
| End bp | 373433 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642679447 |
|---|
| Product | fucose permease |
|---|
| Protein accession | YP_001954243 |
|---|
| Protein GI | 189439162 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.482849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTC TGTTGCTTGC CGTCATCTAT GTGGCGTTTA TCAGTCTGGG ATTGCCGGAT
TCGCTACTCG GATCCGCATG GCCCACCATG AGCCAGGATC TGAACGTGCC GGTGGCGTGG
GCCGGCGGCA TCTCCGCGGT GATTTCCATG TTCACGATCG TCTCGGCGCT GCTTTCGGAC
CGAATGACAT TGAAATTCGG GGCAGGCAAG GTCACCGCCG TTTCGGTGGC GTTGACTGCG
GCGGCCTTGG CCGGTTTCTC CGTTACCTCG AATTACTGGG TGCTGTTGGC CATCGCCATA
CCATACGGCC TTGGCGCGGG CGGAGTGGAT GCGGCGCTCA ATAACTACGT AGCCATTCAC
TACGAAAGCC GGCATATGAG CTGGCTGCAC TGCATGTGGG GCGTCGGCGC ATCGGTCGGC
CCCTACATCA TGGGCTATGC GCTCTCTCAA GGCCAAGGTT GGCCGTGGGG CTATCGGTAC
ATCGCGATCC TGCAGGTGAT GCTGACCGTC ATCCTGGTGC TGAGCCTGCC GCTGTGGAAG
AAACGTGGCG CAATTGCGGT CGGCGAATCG ACCGATGACA CCGCATCATC TGACGGCAAT
GCCGAGAGAT TTGGCACTGC TGAAGGGGTG TCTGTTGCCG AACGCAAACC GCTCGGCGTG
GCCGGCGTGC TCGCCATTCG CGGTGCCAAG GAAATCCTCG TGATGTTCTT CTGCTACTGC
GCCGTCGAAT CTACGGCGGG CCTGTGGGCC TCCAGCTATA TGGTGATGCA CAGCGGCATC
GACAAGATCA CCGCCGCCAG CTGGGCCAGC CTATTCTACG TAGGCATCAC CGTGGGCCGT
GCGCTTTCCG GCTTCCTGAC CATGCGATTC AAGGACCCGG TCATGATTCG CCTCGGCCAA
GTGCTGGTGT TCGCCGGCAT CCTCACCATG TTCGTGCCAT TGCCTCACCA CCTTGGCGTG
GTCGTTGGGC TGGTGGTCAT CGGCTTCGGG TGCGCGCCGA TTTATCCGTG CGTCATCCAC
TCGACGCCGG CCTACTTCGG CGAAGACAAA TCGCAGGCCA TCGTCGGCGT GCAGATGGCC
TGCGCCTATG TGGGCTCACT GCTCATGCCG CCACTGTTCG GCATCATCGC GCAATATGCG
ACAATCAGTC TCTACCCGTG GTATTTGCTG GTGCTCTTGG TGCTGATGGT GGCCATGCAC
GAGCGTCTTC GCAAGTTGCG CGGCTGA
|
|---|
| Protein sequence | MASLLLAVIY VAFISLGLPD SLLGSAWPTM SQDLNVPVAW AGGISAVISM FTIVSALLSD
RMTLKFGAGK VTAVSVALTA AALAGFSVTS NYWVLLAIAI PYGLGAGGVD AALNNYVAIH
YESRHMSWLH CMWGVGASVG PYIMGYALSQ GQGWPWGYRY IAILQVMLTV ILVLSLPLWK
KRGAIAVGES TDDTASSDGN AERFGTAEGV SVAERKPLGV AGVLAIRGAK EILVMFFCYC
AVESTAGLWA SSYMVMHSGI DKITAASWAS LFYVGITVGR ALSGFLTMRF KDPVMIRLGQ
VLVFAGILTM FVPLPHHLGV VVGLVVIGFG CAPIYPCVIH STPAYFGEDK SQAIVGVQMA
CAYVGSLLMP PLFGIIAQYA TISLYPWYLL VLLVLMVAMH ERLRKLRG
|
|---|
| |