| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0227 |
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| Symbol | ispH |
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| ID | 6364097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 288778 |
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| End bp | 289770 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642679374 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001954171 |
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| Protein GI | 189439090 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.135712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA GCGTTGTGCT CGCTGATCCG CGAGGCTTCT GCGCGGGTGT GGACCGTGCG
ATTCTTACCG TACAGACCAT TCTCAAAGCC GCGGAGGCTT CCGGAAAGCG GACGCGCGAG
GATGGGCTGC CCCCGGTATA TGTGCGCCGG CAGATCGTGC ACAACAAGCA TGTGGTCGAG
GACTTGGCCG GGCAAGGCGC GGTGTTCGTC CAGGAATTGG CGGAGATTCC GGATGCTGCT
GCCCAAGCGG GTATTCCGGT GGTGTTTTCC GCCCATGGCG TATCTCCGGT AGTGAAGGCG
GAAGCCGAAC GTCGTGGCAT GCATGTGGTG GATGCCACCT GCCCTCTGGT GGGTAAGGTG
CACCGTGAGG TGCTGCGTTT CGTGCGCGAG GGGTATGAAA TCGTCTATAT CGGGCATAAA
GGTCACGATG AAGCGGTCGG TGTAGTGGGG GAGAGCCCCG AACACGTGCA CTTGATCGAG
CATGAATCGG ATGTCGATTC GCTGGATTTT GCGCCCGACA CCAAGCTGGT GCTGCTCTCG
CAGACCACGT TGAGCGTGGA CGAGACCGCC GATACCATTG CCGCGCTGAA GGCCAAATTC
CCTTGGATTC AAGAGCCGCC GAGTTCGGAT ATCTGCTATG CCACGTCGAA TCGTCAGGCT
GCGGTCAAAC TGGTGGCCCA GCAGTCCGAT TGCGTGGTGA TTGTCGGATC GGCCAACTCC
TCGAATTCCG TGCGACTGAT GGAGGTGGCG CAGGAGGGCT TGGGGGAGCG CGGCAAAGCG
TATCGCGTGG ATGATGCCAG CGAGCTTGAC CCGGCATGGT TCGAGGGTCT GGAATCCGTA
GGTATCTCCT CGGGTGCCTC CGTACCGGAC GAACTGGTGT CCGGTGTGAT TGACGCTCTG
CAAAACTTGG GTTTCACCGG TATGAAGTCC GTCGAAACCA TCAAAGAAAA CATGCACTTT
GTGCTGCCGG CGGAGTTGCG CAGGAAGAAG TAG
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| Protein sequence | MTKSVVLADP RGFCAGVDRA ILTVQTILKA AEASGKRTRE DGLPPVYVRR QIVHNKHVVE
DLAGQGAVFV QELAEIPDAA AQAGIPVVFS AHGVSPVVKA EAERRGMHVV DATCPLVGKV
HREVLRFVRE GYEIVYIGHK GHDEAVGVVG ESPEHVHLIE HESDVDSLDF APDTKLVLLS
QTTLSVDETA DTIAALKAKF PWIQEPPSSD ICYATSNRQA AVKLVAQQSD CVVIVGSANS
SNSVRLMEVA QEGLGERGKA YRVDDASELD PAWFEGLESV GISSGASVPD ELVSGVIDAL
QNLGFTGMKS VETIKENMHF VLPAELRRKK
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