Gene BLD_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0221 
SymbolmurE 
ID6363082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp283396 
End bp284949 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content61% 
IMG OID642679368 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_001954165 
Protein GI189439084 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.302313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGA CTTTGGCTTC GGCCGCTGAC CTGCTCAAGG AACACCATCT GCTGCGTGAA 
ATCATCCAAG GGGATGTCTG GACCGACGAC CCGGCCCGTA TCGCTTCGGC GGATGAGCCG
TTCGCCGGCA TCACCTACGA CACCCGCAAG GTCACGCCGG GCACCCTGCT GTGCTGCAAG
GGCCAGTTCA AGGCCGAATA TCTGAACGGC ATCGACGAAG CCGGCCTGGC CGCATACGTG
GCCGAAACCG AGTACTCAGC CGCAACCGCC ACCCCCGGCC TGATCGTCAA CGACGCACGT
AAGGCGATGA GCCTGCTGTC CGCCGCGTTC TACGGATATC CGCAGAACGA GCTCACGGTC
ATCGGCGTCA CCGGCACCAA GGGCAAGACG ACCACCTCGT ACTTCACGCA GGCGCTTATC
AACGCCGTCT CCGGCGGCAA GGCCGCATTG TTCTCCTCGG TCGATAATTG CCTTGACGGC
CACACCTACG TCGAATCCGA TCTGACCACA CCCGAATCGA TGGACGCCTT CCGCATGATG
CGCGAGGCGG CCGATAACGG TATGAAGTAT CTGGTGATGG AGGTCTCCTC CCAGGCGTAC
AAGGTGGACC GCGTCTATGG CCTGACTTTC GATGTGGCCG CGTTCCTCAA CATCTCCCCC
GACCACATCA GCCCGATCGA ACACCCCACG TTCGAGGATT ACCTGTATTG CAAGCGCCAG
ATCATCGTCA ACGCGAAGTC GCTGGTACTC GGCGCGGACA GTCTGCACGC CGATCTGTTG
CGGGAGGACG CGGAGGCAGC CGGCATCGGC GTGACCACCT TCGCCCTGCA TGACGCGGAT
AATGCCGGCA CCAGTGCGGA CGTCGTCGCC TGGCCCGCCG ACCCGGCGCA CGCCTCCTTC
CACATCGCCG ACGGAGATCA GGCCCTTGGC GACTACCATC TGTCCATCGA TGGCGACTTC
AACTACCTCA ATGCGGCGGC AGCCATCGCC ATCGCCCATG CGGTTGGCGT ATCGCTCGAT
GACGCCGACG CACTGCACGC CATCGAATCC GTACGTATCG CCGGCCGTAT GGAACAGTTC
CGCGACCCGC AGTCAAACAC GCTCGCCATC GTCGATTATG CGCACAACTA CGCATCCGTC
ACCGCGCTGC TTGACTTCGT CTACGAGCGT TGGGGCGAGG AAAACCCGCG TATCACGCTG
GTGACCGGAT CGGCCGGCAA CAAGGCCTAC GATCGTCGTA AGGAAATCGT CGAGGCTGCC
GAGAACCGTA TCGCGAACTT CATTTTCACC GCCGAAGATA CGGACACCGA GCCGATCATC
GACATCTGCA TGGAAATGCA AGGCTACATC ACGAACAAGG ATGTGGTCTC CACGGTGATT
TCCGACCGTC TGACGGCCAT CACCAACGCC ATTTACGATG CCCGTGCGCA CGCCGACCGA
TTCAACATCC TGCTGATCAT CGGCAAGGGC AACGAGCGTT GGATCAAGGA CCATCGCAAG
CATGTGCCGT TCGACGGCGA CGATCACGTC GTCGAACGCA TGTTTGGCTT GTGA
 
Protein sequence
MALTLASAAD LLKEHHLLRE IIQGDVWTDD PARIASADEP FAGITYDTRK VTPGTLLCCK 
GQFKAEYLNG IDEAGLAAYV AETEYSAATA TPGLIVNDAR KAMSLLSAAF YGYPQNELTV
IGVTGTKGKT TTSYFTQALI NAVSGGKAAL FSSVDNCLDG HTYVESDLTT PESMDAFRMM
REAADNGMKY LVMEVSSQAY KVDRVYGLTF DVAAFLNISP DHISPIEHPT FEDYLYCKRQ
IIVNAKSLVL GADSLHADLL REDAEAAGIG VTTFALHDAD NAGTSADVVA WPADPAHASF
HIADGDQALG DYHLSIDGDF NYLNAAAAIA IAHAVGVSLD DADALHAIES VRIAGRMEQF
RDPQSNTLAI VDYAHNYASV TALLDFVYER WGEENPRITL VTGSAGNKAY DRRKEIVEAA
ENRIANFIFT AEDTDTEPII DICMEMQGYI TNKDVVSTVI SDRLTAITNA IYDARAHADR
FNILLIIGKG NERWIKDHRK HVPFDGDDHV VERMFGL