Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0164 |
Symbol | hflX |
ID | 6363046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 207250 |
End bp | 208755 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642679310 |
Product | GTPase |
Protein accession | YP_001954108 |
Protein GI | 189439027 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACCGACA ACACCCAGTA CACCGACATC AACCGCGGCA ACAACGACGT TACCCCTGAA GGTGTGCTGG CCGAGCAGTC CGAAGTGCTG CTCGACGACA GCCAGCGCGC GACCGGCTGG CATGAGGACG CCAACCAGGA ATGGGAGGAG CGCGAGGCCC GCAACGAGCT CAAGCATGTC GCCGGTCTCG GCGAGCTGCA GGACGTCACC GAAGTCGAAT ACCGCAAGGT GCGTCTGGAA CGTGTGGTGC TCGTCGGCGT CTGGTCGTCC GCCGTCACCA CGCAAGCCAA GGCCGAGGAA TCATTGAGAG AGTTGGCGGC GCTCGCCGAA ACCGCCGGTG CGGTGGTATG CGATGGTTTG CTGCAGCATC GCTCCAAGCC GGATGCAGCC ACGTACGTTG GTTCCGGCAA AGCCAAGGAG ATTGCCGACA TCGTGGCGCG TGAGGAAGCC GATACGATTA TCGTGGACGA CGACCTGCCG CCGTCACAGC GCCGTGCATT GGAGGACGCC GCCAAAGTCA AGGTGGTGGA TCGCACCGCG GTGATTCTGG ACATCTTCGC CCAGCACGCC ACCTCGCGTG AAGGTAAGGC GCAGGTGGAG TTGGCGCAGC TCGAATACAT GCTGCCCCGA CTGCGTGGTT GGGGTGGTTC GCTGTCCCGT CAGGCCGGCG GTCGCGCGGC CGGCGCGGAT GCGGGCATCG GATCGCGAGG CCCGGGCGAG ACCAAAATCG AAATGGACCG TCGTGTAATT CGCACGCGTA TCGCCAGACT GCGCCGTCAG ATTCGTGAGA TGGCCCCGGC ACGTGAGGTC AAGCGCGGTT CACGCCGTCG CTTCGGCCTG CCCACAGTGG CCGTGGTCGG CTACACGAAC GCCGGCAAAT CCTCGTTGAC CAACCGTCTG ACCGGTTCGG CCGAACTGGT GGAAAACGCG CTGTTCGCCA CATTGGACAC GGCCGTGCGC CGCGCCAAAA CCCGCGACGG ACGCGCTTAC GCTTACGTGG ACACGGTCGG CTTCGTGCGC CGCCTGCCCA CCCAGCTGGT CGAGGCGTTC AAATCCACCC TGGAAGAGGT GGCCGAGGCC GACGTGATCC TGCATGTGGT CGATGGCTCC CACCCTGACC CGTTCTCTCA GGTCGACGCG GTCAATGACG TGTTGGCGGA CATCGAAGGC ACGGCCTCGA TTCCGCGTAT TCTCGTATTC AACAAGGCCG ATCAGGCGGA CGAGGCGACT CGTGAACGAC TCGCCGCGCT GCAGCCAGAT GCGTTCATCG TCTCCGCCTA TACCGGTGAG GGATTGGACG AGCTGCGTAC CGCGGTCGAA AGTCTGCTGC CGGTCCCGCA TGTGCATGTC AACGCTCTGC TGCCGTATAC CGCTGGCTCC CTGATCTCTC GTGTACGCGA ATACGGCAAG GTAGACAAGG TGGAGTACCG CGATGATGGC ATACAGCTTG AAGCGGACGT TGACGCCCAT CTTGCCGCTC AGGTGGTCGA ACAGTCCATT GACTAA
|
Protein sequence | MTDNTQYTDI NRGNNDVTPE GVLAEQSEVL LDDSQRATGW HEDANQEWEE REARNELKHV AGLGELQDVT EVEYRKVRLE RVVLVGVWSS AVTTQAKAEE SLRELAALAE TAGAVVCDGL LQHRSKPDAA TYVGSGKAKE IADIVAREEA DTIIVDDDLP PSQRRALEDA AKVKVVDRTA VILDIFAQHA TSREGKAQVE LAQLEYMLPR LRGWGGSLSR QAGGRAAGAD AGIGSRGPGE TKIEMDRRVI RTRIARLRRQ IREMAPAREV KRGSRRRFGL PTVAVVGYTN AGKSSLTNRL TGSAELVENA LFATLDTAVR RAKTRDGRAY AYVDTVGFVR RLPTQLVEAF KSTLEEVAEA DVILHVVDGS HPDPFSQVDA VNDVLADIEG TASIPRILVF NKADQADEAT RERLAALQPD AFIVSAYTGE GLDELRTAVE SLLPVPHVHV NALLPYTAGS LISRVREYGK VDKVEYRDDG IQLEADVDAH LAAQVVEQSI D
|
| |