| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0132 |
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| Symbol | thiE |
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| ID | 6363499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 155460 |
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| End bp | 158213 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642679272 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001954076 |
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| Protein GI | 189438995 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase
[COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.436618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATG AATACCCATA CGCCTCCATG CGCGACAGCT TCGACCTGTC CGCGTACTTC
GTGGTGGGGC CGGAGGACTG CAAAGGCCGT CCGCTGACCG ACGTGGTGGA TCAGGCTCTG
CACGGCGGCG CAACCTTCAT CCAACTGCGC GCCAAGGAGG CCGATGCCTC TGAGCTGACC
GACATGGCTC GCGACATCGC GCAAATCATC GAGGACAATG AGAAGTCCGA TTCCGTGGCC
TTTGTGATCG ACGACCGTGC CGACGTGGTG TGGCAGGCCC GCCGCAAGGG CATCAAGGTG
GACGGTGTGC ACATCGGCCA GACCGACATG GAGCCGCGCG AAGCCCGCGC CCTGCTCGGC
GACGAGGCCA TCGTGGGCCT GTCGGCTGAG ACCGAAAGCC TCGTTCGGCT CATCAACGAG
CTGCCCGACG GCTGCATCGA CTACATTGGC GCCGGTCCTC TGCACGTCTC CACCACCAAG
CCCGAGGCTT CCGTGGGCGG CAACGACGGC TCCGGCAAGA CGCTGGACGC CGCCCAGATC
AACACCATCT GCGTTGCCAG CGAATTCCCG GTGGTCGTGG GCGGCGGCGT GACCGCAGCC
GATATGGCCA TGCTCGCCGA TACCAAGGCT GCTGGCTGGT TCGTGGTCTC CGCCATCGCG
GGTGCCGAGA ACCCGGAAGA GGCCGCGCGC ACCATGGTCG AAGGCTGGAA GGCCGTCCGC
GGCGACAAGA AGCACGGCTA CGCTCCGCGC GTCGTAACCC ACACCCCCGC TACTGACACT
CAGGCTGCTC AGGAAGGGGC CGCGAAGCCC GGTTCCGAGG CCACTGAGAA GAAGTTCACC
AACGCCAAGG ACGCCAAGGA TGCCCAGAAG CTTGCCAAGC AGCAGCGCGT GGACATCGCC
GCCCGTGGTT CCAAGCAGCG CGACAAGGCG CACATCCGCA AGACCAAGTC CGTACCGTTC
ACCTATCAGT ATGGTTCCTA CGACCTGGAA GTGCCGTACA CCGAAATCAA GCTGAGCGAC
ACGCCCGGCG TGGGCCCGAA CCCGCCGTTC CACGACTACA ACACCGAAGG CCCCAAGTGC
GACCCGAAGG AAGGCTTGAA GCCCCTGCGT CTCGACTGGA TCCGCGACCG CGGCGACATC
GAAGACTACG AGGGCCGCCG CCGCAACCTT GAGGACGATG GCAAGCGCGC CATCAAGCGC
GGCCGCGCCA CCAAGGAATG GCGTGGACGC AAGCATGAGC CGATGCGTGC CAAGGACCAC
CCGATCACCC AGATGTGGTA CGCCCGCCAC GGCATCATCA CCCCGGAGAT GCAGTACGTG
GCCACCCGCG AGAACTGCGA TGTGGAGCTC GTGCGCTCCG AGCTGGCCGC CGGCCGCGCG
GTGATGCCTT GCAACATCAA CCACCCCGAG GCCGAGCCGA TGATTATCGG ATCCGCCTTC
CTGACCAAGC TCAACGCCAA CATGGGCAAC TCGGCCGTCA CCTCCTCCAT CGATGAGGAA
GTGGAGAAGC TGACGTGGGC CACCAAGTGG GGCGCCGATA CCGTGATGGA CCTGTCCACC
GGTAACGACA TCCACACCAC CCGTGAGTGG ATTCTTCGCA ACTCCCCCGT GCCGATCGGC
ACCGTGCCGA TGTACCAGGC CCTCGAAAAG GTCGAGGATG ATGCCTCCAA GCTGAGCTGG
GAACTGTTCC GCGACACCGT GATCGAACAG TGCGAGCAAG GTGTGGATTA CATGACCATC
CACGCCGGCG TGCTGCTGCG TTACGTGCCG CTGACCGCCA ACCGCGTGAC CGGCATCGTC
TCCCGCGGTG GCTCCATCAT GGCCGACTGG TGCCTGCGAC ACCACCAGGA GAGCTTCCTG
TACACGCACT TCGACGAGCT GTGCGACATC TTCGCCAAGT ACGACGTGGC GTTCTCTCTG
GGCGATGGCC TGCGTCCTGG CTCCCTGGCC GACGCGAACG ACGCCGCGCA GCTTTCCGAG
CTCATGACTC TGGGCGAGCT GACCGAGCGC GCCTGGGCCA AGGACGTGCA GGTGATGATC
GAGGGCCCGG GCCACGTGCC GTTCGACACC GTGCGCATGA ACATCGAGCT GGAGAAGGCC
GTGTGCCACA ACGCCCCGTT CTACACCCTC GGACCGCTGA CCACCGATAC CGCTCCGGGT
TACGATCACA TCACCTCCGC TATCGGCGCC ACCGAGATCG GTCGTTACGG CACCGCTATG
CTGTGCTACG TGACCCCGAA GGAACACCTC GGCCTGCCGA ACAAGGATGA TGTGAAGCAG
GGCGTGATTG CCTACAAGAT CGCCTGCCAC GCCGCAGACA TCGCCAAGCA CCACCCGCAC
GCGATGGATC GCGACAATGC GATTTCCAAG GCTCGCTTCG AGTTCCGTTG GCTCGACCAG
TTCAATCTGT CCTACGATCC GGACACCGCC ATCGCCTTCC ACGACGATAC CCTGCCCGCC
GAGCCGGCCA AGATGGCGCA CTTCTGCTCG ATGTGCGGCC CGAAGTTCTG CTCGATGGCC
ATCTCCCAGA ACATCCGCAA GGCATTCGGC GGCGAGGCCG CTCAGCAGCA AATCGTGAAG
GAGGCTGCTG CAGGCATCGA CTCCGAGGCA CTGGCTACGG CCAAGGCCAA TGTCGATAAC
GGCGTGGTGT CCGCCAACGT GCTCAGCCCC GAAGAAATCC TCGCCGGCAT GGATGCGATG
AGCGAAAAGT ACACCGCCCA GGGCGGCAAG CTCTACTCCA CCGCCCAGGA GTAA
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| Protein sequence | MSNEYPYASM RDSFDLSAYF VVGPEDCKGR PLTDVVDQAL HGGATFIQLR AKEADASELT
DMARDIAQII EDNEKSDSVA FVIDDRADVV WQARRKGIKV DGVHIGQTDM EPREARALLG
DEAIVGLSAE TESLVRLINE LPDGCIDYIG AGPLHVSTTK PEASVGGNDG SGKTLDAAQI
NTICVASEFP VVVGGGVTAA DMAMLADTKA AGWFVVSAIA GAENPEEAAR TMVEGWKAVR
GDKKHGYAPR VVTHTPATDT QAAQEGAAKP GSEATEKKFT NAKDAKDAQK LAKQQRVDIA
ARGSKQRDKA HIRKTKSVPF TYQYGSYDLE VPYTEIKLSD TPGVGPNPPF HDYNTEGPKC
DPKEGLKPLR LDWIRDRGDI EDYEGRRRNL EDDGKRAIKR GRATKEWRGR KHEPMRAKDH
PITQMWYARH GIITPEMQYV ATRENCDVEL VRSELAAGRA VMPCNINHPE AEPMIIGSAF
LTKLNANMGN SAVTSSIDEE VEKLTWATKW GADTVMDLST GNDIHTTREW ILRNSPVPIG
TVPMYQALEK VEDDASKLSW ELFRDTVIEQ CEQGVDYMTI HAGVLLRYVP LTANRVTGIV
SRGGSIMADW CLRHHQESFL YTHFDELCDI FAKYDVAFSL GDGLRPGSLA DANDAAQLSE
LMTLGELTER AWAKDVQVMI EGPGHVPFDT VRMNIELEKA VCHNAPFYTL GPLTTDTAPG
YDHITSAIGA TEIGRYGTAM LCYVTPKEHL GLPNKDDVKQ GVIAYKIACH AADIAKHHPH
AMDRDNAISK ARFEFRWLDQ FNLSYDPDTA IAFHDDTLPA EPAKMAHFCS MCGPKFCSMA
ISQNIRKAFG GEAAQQQIVK EAAAGIDSEA LATAKANVDN GVVSANVLSP EEILAGMDAM
SEKYTAQGGK LYSTAQE
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