| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0118 |
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| Symbol | recO |
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| ID | 6362712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 139931 |
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| End bp | 140650 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679258 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001954062 |
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| Protein GI | 189438981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.522104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCTGT ACCGAGACGA AGGTGTGGTG TTGCGCACCT CCAAACTGGG CGAGGCTGAT
CGTATCATCA CCATCCTGAC GCGTGGGCAT GGCAAGATTC GGGCGGTCGC CAAAGGCGTA
CGTCGCACCA AATCACGCTT TGGTGCCAGG CTCGAGCCGT TCATGCGAGT CGATGTGCTT
ATCGCTGAAG GCCGCTCGCT TGACGTGGTC TCCCAAGCTG AAGCGGTCGC CGCTTATGGT
GCTCCGATCG CGGCGGATTA TGCGGCGTAT GAGGCCGCCA ACGTCATCGT TGAGACTATC
GATAAAATCG CCAGCACCGA ACATGAGCAG TTGCCGAACC AATATCGGCT GCTCATCGGC
GCGTTGAACG CGCTCGCCAA ACAATCCCAC GCCCCGCAAG CCATAGGAGA CTCCTACGTG
ATGCGCGCCT TGGCCTTGGC CGGTTGGACG CCGCGATTGG GCACTTGCGT GGTATGCGGC
AAGGCGGAGC CGGCGTACCT GTCCATCGCG TCCGGCGGCG TGATGTGCGA AGCCGACCAC
ACTACCGATG CGCGCCGTAT CGCACCGTTC GTGTTAAACC AGTTCGATGC ACTGATTCGT
GGCGATTGGT CGGTGCTTGA TGCCGCGCCT GTGGAGCGGG TTGTGCAGGA GTTGGTTGAA
GATTGGGGGG AGTATTACCT CGAACGCCCG ATTCGTTCGC TGCGCTTGAT AGATTCATGA
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| Protein sequence | MSLYRDEGVV LRTSKLGEAD RIITILTRGH GKIRAVAKGV RRTKSRFGAR LEPFMRVDVL
IAEGRSLDVV SQAEAVAAYG APIAADYAAY EAANVIVETI DKIASTEHEQ LPNQYRLLIG
ALNALAKQSH APQAIGDSYV MRALALAGWT PRLGTCVVCG KAEPAYLSIA SGGVMCEADH
TTDARRIAPF VLNQFDALIR GDWSVLDAAP VERVVQELVE DWGEYYLERP IRSLRLIDS
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