| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0088 |
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| Symbol | polC |
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| ID | 6363638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 109581 |
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| End bp | 110288 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642679227 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001954032 |
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| Protein GI | 189438951 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCACTT CCGGCATTAC CGTTTTCGGC CAACCATCCC AGCCCAATCA TGGTGCCGGC
GGGCGAATCG CCATGGACGA TGCCGTCTTC CCCACCGATT ATGTGGCGCT GGATTTGGAG
ACCACCGGCT TTTACCCGAA CAGTTGCGCC ATCACGGAAA TCGGTGCCGT GCGCGTGCGG
GAGGGGCATA TCGTCGATCA ATTCCAGCAG CTGGTGAATC CCTTGCGGCC GATTCCGCGT
CAGATCACCA CGCTGACCGG CATCACCGAT GCGATGGTGG CCGACCTCGA TCCGATTGAC
GAGGTGCTTC CCCGATTCAT CGCATGGCTC GCTACCCCGG CTGCCGGTCC CGCCGTCGAG
CCGATTGTCG GCCATAACGT CAGCTTCGAT CTGCGATTCC TGGATTACAA CACCCGGCAT
ATCGCCGGCT GCGGCTTTGC CTGCGCGGAT TATGACACGA TGCAGATCAG CCGCGCCCTG
TTCCCCGCGC AGCGGCATCA CCGTCTGGCC GACCTGATCG TACGCTTCGG CATCGCGGAC
AATGAGGAGC ACCGCGCATT AAGCGATGCC ATCCAAACCC AGCAGTGCTT CGAATGGATG
CGGCATTATG TCACCGAGCA TCACGAATCC GAAGCGATCC GCTGGAAGCA GGCGCCGGCC
AAAAACAGCG CCGAAATCCT CCACCAGCAG TTGGTGGTAA AGCGGTAG
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| Protein sequence | MTTSGITVFG QPSQPNHGAG GRIAMDDAVF PTDYVALDLE TTGFYPNSCA ITEIGAVRVR
EGHIVDQFQQ LVNPLRPIPR QITTLTGITD AMVADLDPID EVLPRFIAWL ATPAAGPAVE
PIVGHNVSFD LRFLDYNTRH IAGCGFACAD YDTMQISRAL FPAQRHHRLA DLIVRFGIAD
NEEHRALSDA IQTQQCFEWM RHYVTEHHES EAIRWKQAPA KNSAEILHQQ LVVKR
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