Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0083 |
Symbol | nusB |
ID | 6363633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 102518 |
End bp | 103090 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642679222 |
Product | transcription termination factor |
Protein accession | YP_001954027 |
Protein GI | 189438946 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTT CCACCGCGCG CAAAAGGGCT CTGAACACCC TGTACGAAGC CGACGAAAAA AGCCAGGATA TTCTCTCCCT GCTTGACGAG CGCATCGCAC ATCCCGGTGC CCAGACCCCG CTTCCCGACT ATGCCATTGA AATCGTCAAG GGCGTGGCCG AGCACCGTCG TCAGATCGAC ATGACCCTGG ACGAACACTC CACGGGTTGG AAGGTCCGCC GTATGGGCGT GGTCGATCGC AACATTCTGC GTATCGCCGC TTGGGAGATT CTGTTCACCG ATGATGTGCC GGACAAGGTC GCCATCGACG AGGCTCTGGC ATTGGCCAAG ACCCTGTGCG ATGACGATTC GCCCGCTTTC ATCCATGGCC TGCTGTCTGC GGTGTGCACC GCCAAGAATG CAGCACCGGC ACCGGAGTCC GTGGCAGAAG AGGCCGATGA GGAATCGTCC GATTCCGCTG CCGCCGCATC CGAGCCGACC GATGAGGGCG ATGTTTCCGA TTCGCCCGAT TCGTCCGGTG CATCCGACGA GCCTGCTGCC CCGTCCGCTG AGATTCAGCC GACGGTCGAT TAG
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Protein sequence | MARSTARKRA LNTLYEADEK SQDILSLLDE RIAHPGAQTP LPDYAIEIVK GVAEHRRQID MTLDEHSTGW KVRRMGVVDR NILRIAAWEI LFTDDVPDKV AIDEALALAK TLCDDDSPAF IHGLLSAVCT AKNAAPAPES VAEEADEESS DSAAAASEPT DEGDVSDSPD SSGASDEPAA PSAEIQPTVD
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