Gene BLD_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0083 
SymbolnusB 
ID6363633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp102518 
End bp103090 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID642679222 
Producttranscription termination factor 
Protein accessionYP_001954027 
Protein GI189438946 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTT CCACCGCGCG CAAAAGGGCT CTGAACACCC TGTACGAAGC CGACGAAAAA 
AGCCAGGATA TTCTCTCCCT GCTTGACGAG CGCATCGCAC ATCCCGGTGC CCAGACCCCG
CTTCCCGACT ATGCCATTGA AATCGTCAAG GGCGTGGCCG AGCACCGTCG TCAGATCGAC
ATGACCCTGG ACGAACACTC CACGGGTTGG AAGGTCCGCC GTATGGGCGT GGTCGATCGC
AACATTCTGC GTATCGCCGC TTGGGAGATT CTGTTCACCG ATGATGTGCC GGACAAGGTC
GCCATCGACG AGGCTCTGGC ATTGGCCAAG ACCCTGTGCG ATGACGATTC GCCCGCTTTC
ATCCATGGCC TGCTGTCTGC GGTGTGCACC GCCAAGAATG CAGCACCGGC ACCGGAGTCC
GTGGCAGAAG AGGCCGATGA GGAATCGTCC GATTCCGCTG CCGCCGCATC CGAGCCGACC
GATGAGGGCG ATGTTTCCGA TTCGCCCGAT TCGTCCGGTG CATCCGACGA GCCTGCTGCC
CCGTCCGCTG AGATTCAGCC GACGGTCGAT TAG
 
Protein sequence
MARSTARKRA LNTLYEADEK SQDILSLLDE RIAHPGAQTP LPDYAIEIVK GVAEHRRQID 
MTLDEHSTGW KVRRMGVVDR NILRIAAWEI LFTDDVPDKV AIDEALALAK TLCDDDSPAF
IHGLLSAVCT AKNAAPAPES VAEEADEESS DSAAAASEPT DEGDVSDSPD SSGASDEPAA
PSAEIQPTVD