| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0047 |
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| Symbol | araH1 |
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| ID | 6363768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 58838 |
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| End bp | 59908 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642679186 |
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| Product | ribose/xylose/arabinose/galactoside ABC transporter permease |
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| Protein accession | YP_001953991 |
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| Protein GI | 189438910 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000657164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA AGGCAAAAGA CGAGGGCAAC AACTTTGTCA AGAAGCTGCT GAGCAGCAAC
CTGACCTGGT CGATCGTCGC ATTCATTCTT CTGGTCATCA TCTGCACCAT CTTCCAGCAT
GACTTCCTGG CTTTGAGCTG GAACAGCAAC ACCGGTGGTC TGGCCGGCCC GCTGATCACC
ATGCTCCAGG AATCTGCCCG ATACCTGATG ATTGCAACCG GTATGACCTT GGTTATCTCC
ACCGCCGGTA TCGACCTTTC GGTCGGTTCC GTTATGGCAG TGGCAGGTGC CGCCGCCATG
CAGACCCTGT CCAATGGCAT GAACGTGTGG CTCTCCATCC TCATCGCCTT GGCTGTTGGT
CTGGCCATTG GCTGCGTCAA CGGCGCTCTG GTTTCCTTCC TGGGCCTACA GCCGTTCATC
ACCACCCTGA TTATGATGCT CGCCGGCCGT GGTATGGCCA AGGTCATCAC CTCCGGTGAG
AACACCGACG CCTCCGCAGT TGCTGGCAAC GAACCGCTGA AGTGGTTCGC CAACGGCTTC
ATTCTGGGCA TTCCCGCCAA CTTCGTCATC GCCGTTATCA TTGTGATTCT CGTTGGCCTG
CTGTGCCGCA AGACCGCTAT GGGCATGATG ATTGAGGCCG TGGGCATCAA CCAGGAAGCC
TCCCGTATGA CCGGTATCAA GCCGAAGAAG ATCCTCTTCC TCGTCTACGC GATTTCCGGC
TTCCTCGCGG CCATCGCTGG TCTGTTCGCC ACCGCATCCG TGATGCGTGT CGACGTGGTT
AAGACCGGTC AGGACCTCGA AATGTACGCC ATTCTGGCAG TCGTCATCGG CGGTACTTCA
CTGCTGGGTG GTAAGTTCTC CCTCGCCGGC TCTGCTGTCG GTGCTGTAAT TATCGCCATG
ATCCGCAAGA CCATCATCAC CCTGGGCGTC AACGCCGAGG CAACTCCGGC CTTCTTCGCC
GTCGTTGTGA TTGTGATCTG CGTGATGCAG GCTCCGAAGA TTCACAACCT GAGCGCGAAT
ATGAAACGCA AGCGCGCGCT CAAGGCTCAA GCTAAGGCGG TGGCAGCATG A
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| Protein sequence | MAEKAKDEGN NFVKKLLSSN LTWSIVAFIL LVIICTIFQH DFLALSWNSN TGGLAGPLIT
MLQESARYLM IATGMTLVIS TAGIDLSVGS VMAVAGAAAM QTLSNGMNVW LSILIALAVG
LAIGCVNGAL VSFLGLQPFI TTLIMMLAGR GMAKVITSGE NTDASAVAGN EPLKWFANGF
ILGIPANFVI AVIIVILVGL LCRKTAMGMM IEAVGINQEA SRMTGIKPKK ILFLVYAISG
FLAAIAGLFA TASVMRVDVV KTGQDLEMYA ILAVVIGGTS LLGGKFSLAG SAVGAVIIAM
IRKTIITLGV NAEATPAFFA VVVIVICVMQ APKIHNLSAN MKRKRALKAQ AKAVAA
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