| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0045 |
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| Symbol | rbsB |
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| ID | 6363766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 56171 |
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| End bp | 57154 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642679184 |
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| Product | sugar ABC transporter periplasmic protein |
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| Protein accession | YP_001953989 |
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| Protein GI | 189438908 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00285996 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAATT GGAAGAAGGC CATTGCCCTC GTTGCTTCTG CTGCTGCGCT TGTCAGCGTT
GCCGCATGCG GTTCCAGCAA CGCAGGTGGC AGCTCGGACT CCGGCAAGAA GACGGTTGGC
TTCGTGGCTG TCGGTCCTGA GGGCGGCTTC CGTACCGCCA ACGAGAAGGA CATTCAGAAG
GCATTCGAGG ATGCCGGCTT TGACCTGACC TACTCTCCGA CCCAGAACAA CGATCAGCAG
AAGCAGATTC AGGCGTTCAA CAAGTTCGTT AACGACGAAG TCGACGCCAT CATCCTGTCC
TCCACCGAGG ATTCCGGTTG GGATGACTCC CTGAAGAAGG CCGCTGAGGC TGAGATTCCG
GTCTTCACCG TTGACCGTAA CGTGGACGTC AAGGACGCCG AGGCCAAGAA GGCCATCGTT
GCTCACATCG GACCGTCCAA CGTCTGGTGC GGCGAGCAGG CTGCCGAGTT CGTGAACAAG
AACTTCCCGG ATGGCGCCAA CGGCTTCATC CTCGAAGGCC CTGCCGGCCT GTCCGTGGTG
AAGGATCGTG GCACTGGTTG GGGCAACAAG GTTGCCTCCA ACGTCAAGGT TCTTGAGTCC
CAGTCCGCTA ACTGGTCCAC TGATGAGGCC AAGACCGTGA CCGCTGGTCT GCTCGACAAG
TACAAGTCCG ACAACCCGCA GTTCATCTTC GCTCAGAACG ACGAGATGGG CCTCGGTGCC
GCTCAGGCTG TTGACGCCGC CGGCCTCAAG GGCAAGGTCA AGATCATCAC CATCGACGGT
ACCAAGAACG CTCTGCAGGC TCTTGTTGAT GGTGACCTCT CCTACGTGAT CGAGTACAAC
CCGATTTTCG GCAAGGAAAC CGCTCAGGCC GTCAAGGACT ACCTGGATGG CAAGACCGTT
GAGAAGGACA TCGAGATCGA GTCCAAGACC TTCGACGCCG CCTCCGCCAA GGAAGCTCTG
GACAACAACA CCCGCGCCTA CTGA
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| Protein sequence | MKNWKKAIAL VASAAALVSV AACGSSNAGG SSDSGKKTVG FVAVGPEGGF RTANEKDIQK
AFEDAGFDLT YSPTQNNDQQ KQIQAFNKFV NDEVDAIILS STEDSGWDDS LKKAAEAEIP
VFTVDRNVDV KDAEAKKAIV AHIGPSNVWC GEQAAEFVNK NFPDGANGFI LEGPAGLSVV
KDRGTGWGNK VASNVKVLES QSANWSTDEA KTVTAGLLDK YKSDNPQFIF AQNDEMGLGA
AQAVDAAGLK GKVKIITIDG TKNALQALVD GDLSYVIEYN PIFGKETAQA VKDYLDGKTV
EKDIEIESKT FDAASAKEAL DNNTRAY
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