| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0031 |
|---|
| Symbol | |
|---|
| ID | 6363607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 36163 |
|---|
| End bp | 37128 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642679170 |
|---|
| Product | Integrase |
|---|
| Protein accession | YP_001953975 |
|---|
| Protein GI | 189438894 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4973] Site-specific recombinase XerC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.293171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCCA CGGAACACGG ATTCGTCGGC CCGCTCGCCG GCGAATTGGA GGAGTACATC
CGCTTCAAGG CGTCCATGGG CAGGCATGGC GCCACCCGCG TCCAGGTCCT GCGCTCGTTC
GACCGGCATT GCCTCGAACA CGGGGCCGTG CGTCTGGAGC GGGGCGTCGT GGAGCGATGG
ATCGCCCATA GGATCGACGC GAATCCCGGG GGTTGCCGCT CGTGGTTCTC GTACATCAGG
GACTTCGGCA GGTGGATGCG ACTGGCCCAC GATCCCGACG CGTACGTGCT CTCCGACCAG
TGGAAGGCCG GATCCCCGCG TCCGACGCCG TACCTGCTGA CGGACCGCGA GGCCGCCCTG
TTCCTGCGGG CCGCGGGAAC GTTGGAGTCT CCGTCGCCGT GGGCGTGGCA GTCTCGCGCG
TTCTTCATGC TCATGGCCTG CTGCGGGCTG CGCACCCGAG AGGTCAGGAG ACTCGCCGTC
GGGCACGTCG ACCACAAGGC CCGTTCCATC GACGTGGTCG ATTCCAAGGC CGGTCGCAGC
CGCAGGCTGC CCGTGGGCGA CGAGGTCGCC GCCGAACTGC TGGAATGCGA CCAACGGTCC
CGCGAACGCT TCGGAGACGA CCGTCCCGCG TTCTTCGTCA CCTCCACCGG CAATCCGGTC
TCCCCGGGCA TGCCCGGCGT GGTGTTCCGC CGCGTCTGGA CGCGGGCCGG GCTCGAGTGG
CCACAAGCCG GCAAACGGCC CAGGCCCTAT GATTTCCGGC ACCGGTTCGC GTTCGCGAAC
ATCGAGCGGT GGACTCGCGA CGGCGTGGAC GTGATGGCGA TGCTGCCCTA TCTGGCGGCC
TACATGGGAC ACGCCGGCAT CGACAGCACC CTCTACTACG TGCACGCCAG CCCCGATTTC
ATGGACGGAT ACGCGGACCT CGTCGCCGAC GCCGAACGCG TGGTCCCGGA AACGGAGGAA
CCATGA
|
|---|
| Protein sequence | MRPTEHGFVG PLAGELEEYI RFKASMGRHG ATRVQVLRSF DRHCLEHGAV RLERGVVERW
IAHRIDANPG GCRSWFSYIR DFGRWMRLAH DPDAYVLSDQ WKAGSPRPTP YLLTDREAAL
FLRAAGTLES PSPWAWQSRA FFMLMACCGL RTREVRRLAV GHVDHKARSI DVVDSKAGRS
RRLPVGDEVA AELLECDQRS RERFGDDRPA FFVTSTGNPV SPGMPGVVFR RVWTRAGLEW
PQAGKRPRPY DFRHRFAFAN IERWTRDGVD VMAMLPYLAA YMGHAGIDST LYYVHASPDF
MDGYADLVAD AERVVPETEE P
|
|---|
| |