| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0022 |
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| Symbol | hisM1 |
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| ID | 6364384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 27856 |
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| End bp | 28533 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679161 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_001953966 |
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| Protein GI | 189438885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.110692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGGAT TCCTGGAACT CTTCAGCCAG TATGACGTGC TCGGCGCGTT TCTGGTCAAT
ATCGAACTGA CCCTATGGTC CGCCCTGTTC TCCCTGATCC TCGGCGTGAT CCTTGTGGTG
ATGCGCATCT CGCCGATTTC CTCGCTCAGG GCCGTGGCCG GTGCGTATGT GGAACTGTTC
AAGAACCTGC CGCTGACCAT CATCATGGTG TTCATGGTGC TGGGTGCCTA CGCGCAGCTG
AAGCTCAGCT TCTCCGACAC CTTCACCACG AACTTCTTCT GGCTCGCGGT CACCGGCCTG
AGCCTGTACA CGGCGGCGTT CGTGTGCGAA TCTCTGCGTT CGGGCATCAA CACCGTGCCG
ATTGGCCAGG CCGAGGCCGC ACGAGCGCTG GGCTTGGGCT TCATGCAGTC CGCCACCGAG
ATCATTCTGC CGCAGGCCTT CCGAGGCTCC GTGGCACCGC TCGGCAACAC GCTGATCGCC
CTGCTCAAGA ACTCCACCGT GGCCGCCGCC GCATCCGTGG CCACCGAAAC ATCCTCGCTG
ATGAGCGAGA TGATCGAATT CCGTCCCGAC GTGATCATCC AAATCTTCCT GATCTTCGCG
CTCGGCTACG TGATCCTGAT CATCCCCATC GGCATGCTCA CCACGTACCT GTCCAACAAA
CTCGCCGTAA GGAGGTGA
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| Protein sequence | MSGFLELFSQ YDVLGAFLVN IELTLWSALF SLILGVILVV MRISPISSLR AVAGAYVELF
KNLPLTIIMV FMVLGAYAQL KLSFSDTFTT NFFWLAVTGL SLYTAAFVCE SLRSGINTVP
IGQAEAARAL GLGFMQSATE IILPQAFRGS VAPLGNTLIA LLKNSTVAAA ASVATETSSL
MSEMIEFRPD VIIQIFLIFA LGYVILIIPI GMLTTYLSNK LAVRR
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