Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0017 |
Symbol | hisS |
ID | 6364379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 20980 |
End bp | 22323 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642679156 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001953961 |
Protein GI | 189438880 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.6817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCAGC GTGTTATCGA TACGCTTCGT AAGGTTTTTG AGCTCAACGG CTTCATCGGC ATTGAGACGC GAGCGGTGGA AACCGGCGCT TCTTTGTTGA AAAAAGGCGA GACCAGCAAG GAGATCTACC TGCTGAGCCG TTTGCAGGAG GTCGGTCATG AATCCGACAC TCCGATTGAA GAGCGGTTGG GCCTGCATTT CGATCTGACC GTGCCGCTGA GCCGGTATGT GGTCGAGCAC TCGGGTGCGT TGGCGTTCCC GTTCAAGCGC TGGCAGATTC AGAAGGTGTG GCGTGGCGAG CGTCCGCAGG AAGGCCGCTT CCGCGAGTTC GTGCAGGCCG ACATCGACGT GATCGGTGCC GGCGACCTGC CCGACCACTA TGAAGTGGAA CTGCCGCTGG TCATGGTCTC CGCACTGGAA GAGCTGCGCG CGTATGGCCT CCCCAAGGCC ACCGTGCACG CCAATAACCG CAAGTTGTCT GAAGGCTTCT ACCGCGGCCT TGGCCTGACG GACGTCGAAG GCGTGCTGCG CGAGATCGAC AAGCTCGACA AGATCGGTGC CGATGAGGTG GCCCGACTGC TCACCGAGAC CTGCGGCGCC ACCGAAGCAC AGGCACGCGC CTGCCTCGAA TTGGCCGAGC TCAACGCCTC CGACGGTGCC GAGCTTGCCG CCAAGTTCGA TGCGCTGTGC GAGGCTCACG GCATCGTCAA GGATTCCGAG GCCTACACGC TGGCTCGTCA GGGACTCGAT ACCCTGGCCA TGATCGTCGA CGAAGCCGCC GCCATCCGCC CCGGTTCCGT CATCGCCGAC CTGAAGATCG CCCGCGGTCT CGACTACTAC ACCGGTTCCG TCTACGAGAC CTTCCTCGAC GGTGCCGCAT CACTCGGCTC CATCTGCTCC GGTGGCCGTT ACGACAATCT CGCCTCCCAG GGCAACCGCA AGTACCCGGG CGTGGGCCTG TCCATCGGCC TGAGCCGACT GGTCAGCTAC ATGCTGCACA CCGCCGGCGC TCACGCCAAC CGTGTCAGCC CGGCCGCCGT GCTGGTCGCT GTGTGGAATG AAGAGGACCG CCCGGCCGCC AACCGTATTG CGAACCAACT GCGTGCGCGC GGCATCGCCA CCGACGTGGC ACCCACCGCG GCCAAGCTCG GCAAGCAGAT CAAGTACGCG GACAAACTCG GCATTCCGTA CGTGTGGTTC CCGGCCACCG CTGCCGAAGG TGCGGAAGGC GCAGAGCCCG CTGGCGACGA GGTCAAGAAC ATCGTCACGG GCGAGCAGGT TGCCGCCGAT TGCACGTCGT GGGAGCCGGA TACTGTGGTT GCCCAGCAAA CCGTCGAAAT CTGA
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Protein sequence | MEQRVIDTLR KVFELNGFIG IETRAVETGA SLLKKGETSK EIYLLSRLQE VGHESDTPIE ERLGLHFDLT VPLSRYVVEH SGALAFPFKR WQIQKVWRGE RPQEGRFREF VQADIDVIGA GDLPDHYEVE LPLVMVSALE ELRAYGLPKA TVHANNRKLS EGFYRGLGLT DVEGVLREID KLDKIGADEV ARLLTETCGA TEAQARACLE LAELNASDGA ELAAKFDALC EAHGIVKDSE AYTLARQGLD TLAMIVDEAA AIRPGSVIAD LKIARGLDYY TGSVYETFLD GAASLGSICS GGRYDNLASQ GNRKYPGVGL SIGLSRLVSY MLHTAGAHAN RVSPAAVLVA VWNEEDRPAA NRIANQLRAR GIATDVAPTA AKLGKQIKYA DKLGIPYVWF PATAAEGAEG AEPAGDEVKN IVTGEQVAAD CTSWEPDTVV AQQTVEI
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