| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0015 |
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| Symbol | ushA1 |
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| ID | 6364377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 17535 |
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| End bp | 19157 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679154 |
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| Product | 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like esterase |
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| Protein accession | YP_001953959 |
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| Protein GI | 189438878 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCATTG CCGACATCAC TGATTTTCAC GGGCATATCG AACGTGGTGC GGACAACGCC
ACCGCCTTCA CCGTGGCCGA CAGCCATAAT CCCGGCAATA TGATTCCGGT ATCGACCGGC
GATTTGGTGG GAGGCTCCCC GTATGAGTCG GCGGTGGAGA AGGACCAACC CACGCTGGAT
ATGGCCAAAG CGTGGGGATT GACGATTTCG GCGGTAGGCA ACCATGAGTT CGACCGCGGT
GTCGCCGATT TCAACAATCG CATCGCTGAT CCCAGCAACG GCATCGACTG GCTGTGCGCC
AACACGTCTG CCGCCAATAA GTCGCCTGAC GGACTGCTGA GCCACGTACG TGACTCTACG
ATTCGAACGG TGAACGGCAA GCGAATAGGT TTCGTGGGCG CCCTTACTGA TGCGCTCGGC
TCGGTAGCCA CTCCGCAGAT CACTCGTGAT GCCGACCTTG ACGAACGGGC GGTGGACGCG
ATCAATCGTG TGGCCCGTGA ACTCAAGCGC TCCGGAAAGG TGGATGCGGT GGTGGCCTTG
CTGCACGCCG ATGCCTCAGC CGCCGCCGAT ATTGGGCGAG ATGTTGATGT GGTATACACC
GGTCACAGTC ACGCGATCAA GCACGGTACA ACCGCGGGTG GCGCGCCTAT TTACGAGGCG
GGCAGCTTCG GGCGGAACAT GGCCGTGCAG GATTTGATCA TCACCGGTGC CGGGCGTCGC
GCCACGGTGC GAGTGGCCGA CGTTGACCTC GGCAATGGCA CCAGCCATAC GGCGGTTGAC
GGCGTGCTGG GCGTGGAAGG GCTTAATGCG CATCCGGCGC AAGCCGCTTG GATGTCTGCC
GGTGCTGAGG AGAACGATGA GGTATCGCGC GCTCAGCATA TTTACCAGGC GGCGGCAACA
TATGCGAACC ATACCGGCAG CGCGGTGATT GGCACCTTGG CCTCCGGCGT GAATTTCGAC
AAACAAGGTT CGGACAAGCA CGGGAATACG GTCGGTGTGC TGGTGGCGGA CGCGAACCGA
GAGTCAATCA TGAAGCATGT GTATGCCGGG AATCGCTTGC CGGTAATCGG ATTTTCGAAT
AATGGCAGTC TGCGGACTCC ACGGCTTGAT ATGAATGGCG ATGGCAAAGT CACCGTGCGC
GAGGTGGATA GTCTCATGGC CTTGCAGTTC AAGGCCGCGC ATGAGACGCT CACCGGGCGC
GATGTGAAGA GAGTGCTCGC CGAGCAATTT CGCCGTGACG ATGGGCGACT GGAGCGGCGC
TGGCTCGGCA TCTCCTCGAA CGTGACGTAT CGGTATGCCG AATGCGGTAC GGCTGGTGAG
AGCGGCAATG CCGATGCCGC CGCTGATACC AACGCTGACG CTGATGAGTG TGCTGCCGAC
GAACATGCGG CGGTTCGTAT CGTGAACCTC GCCGTTGACG GCCGACCGAT TGCGGACGAT
GACCTGGTGA TTATCGCGTC CAATTCATAT CTGCTTCAGG GCGGCGACAG TTACCCCGCC
TTCCGTGCCG GAACCAATTA CGGCGAGCTG AATATGCCAT ACAGCCAGCC GTTGCATGAA
TATCTGGCCG CACATCAAGG GCTCACGGCA GTTGTTGCAG TACCGGTAGG GACTCAGGCG
TAA
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| Protein sequence | MTIADITDFH GHIERGADNA TAFTVADSHN PGNMIPVSTG DLVGGSPYES AVEKDQPTLD
MAKAWGLTIS AVGNHEFDRG VADFNNRIAD PSNGIDWLCA NTSAANKSPD GLLSHVRDST
IRTVNGKRIG FVGALTDALG SVATPQITRD ADLDERAVDA INRVARELKR SGKVDAVVAL
LHADASAAAD IGRDVDVVYT GHSHAIKHGT TAGGAPIYEA GSFGRNMAVQ DLIITGAGRR
ATVRVADVDL GNGTSHTAVD GVLGVEGLNA HPAQAAWMSA GAEENDEVSR AQHIYQAAAT
YANHTGSAVI GTLASGVNFD KQGSDKHGNT VGVLVADANR ESIMKHVYAG NRLPVIGFSN
NGSLRTPRLD MNGDGKVTVR EVDSLMALQF KAAHETLTGR DVKRVLAEQF RRDDGRLERR
WLGISSNVTY RYAECGTAGE SGNADAAADT NADADECAAD EHAAVRIVNL AVDGRPIADD
DLVIIASNSY LLQGGDSYPA FRAGTNYGEL NMPYSQPLHE YLAAHQGLTA VVAVPVGTQA
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