| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3556 |
|---|
| Symbol | |
|---|
| ID | 6366344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3828402 |
|---|
| End bp | 3830306 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642678971 |
|---|
| Product | TonB-dependent receptor plug |
|---|
| Protein accession | YP_001953777 |
|---|
| Protein GI | 189426600 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
|---|
| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000211979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA GTAGACAGAA GTATGCAGTA GCATTGGGGC TGATCCTGGC AGTCTGTGGC
TCAGCAATGG CAGAGGAAAA AACCACCCAA CTGGGCGAGG TGGTGGTGAC CGCCACCCGT
GACGAGGTGC CGATTGAGCA GGTGGGCAGC TCCATCACCG TGGTCACGGC CAAGGAGATC
GAGCAACAGC AGAAACGGAC CGTGGCCGAC GCGCTGCGGA TGGTGCCGGG ACTGGACCTG
GTCCGCACCG ACAGCTTTGG CGGCACCACC GCCGTGTTCA TGCGCGGCGC CAAATCAGAG
CATACCCTGG TGCTGATTGA CGGCATCCAG ATCAATGACC CGTCATCAAC CGGCGGCGGC
TACAACTTTT CCAATCTGAC CACCGACAAT ATCGAGCGGA TCGAGATTTT GCGCGGCCCC
CAGAGCACCC TCTACGGCTC CCATGCCATT GGCGGCGTGA TCAACATCAT CACCAAACGG
GGGGATGGCA AACTGAAAGG CTTCCTGTCT GCAGAGGGGG GCTCCTTTGC CACGGCCCGG
GAAAGCGCCG GTCTCAATGG CGGCAATGAC CTGCTGCAGT ACTCATTAAG CGTCTCCCGG
CTGGATACCG GTGGTGTTTC CGCAGCGGGT GAGCGGTATG GCAACGTTGA ACGGGACGGC
TACCAGAACA CGGCAGTGGC CGGACGGCTG GGCATCACCC CGACCACCAA TTCGGAGATA
GACCTGACCC TGCGCTATGA CCGTTCCCGC ACCTCGGTTG ACAACGGTGG TGGTGCCGGA
AAGGATGACC CGAACCACGT CATGAAGTCC GACGAGCTGT TTTTCAGGAC ACAGGGCTGG
CTCTCGCTGT TTAACGGGTT GTGGGATCAA AAGCTGGGTG TATCGTTCAG CGACATCAGC
TGGCGTGATG ATAATGACCG CGACAGCGCC CATCCCAACG ATCTGCTGCG CAGCTCGTTC
CACGGCCAGA GTGTCAAGCT GGACTGGCAG CACACCCTGA AGCTGCACAA GACCACCACT
CTGGTGGTTG GCGCCGAGAC CACCGAAGAA AACGGCAAGT CGGATTACTA TTCCGAGAGC
ATGTTTGGCC CCTACACCAG CACCTGGGAT GAGCGCTTTG CCCGTACCAC CGGCGTCTAC
CTGCAGGACC AGCTCAATCT GTTCGATGCC TGGTTCTCCA CACTGGGCGT TCGGGTGGAT
GACCACAGCA AGTTCGGCAC CGAGGCGACC TATCGCTTTA CCACCGCCTA TCTGATCAAG
CAGACCGACA CCAGACTGAA AGGCAGCTAC GGCACCGGCT TCAAGGCACC TTCCCTGTAC
CAGCTCTACT CAAGCTACGG CTCACCGGAC CTCAAGCCGG ACAAGAGCAT CGGCTGGGAT
GTTGGTGTAG AACAAGGGTT GCCGTTTATG AAGACCACCC TGGGGGCAAC CTGGTTCAGA
AATGAATATT CACAGATGAT TGATTTTGAT ATGACTACCT GGAAATACAC CAACGTTGCC
AAGGCGCATA CCCACGGGTT AGAGCTGACC GCAGCCCTGC AACCGGTGGA TGACCTGACC
CTGAAGGCTG CCTACACCTA TCTGGAAACC AGGGACGACA TCAGCGGCAA GCAGCTGGTA
CGCCGCCCCA AGAACAAGGC GAGCTTTGAC ATCAACTACA GCTTCCTGAA AAAGGCCAAC
ATAAACCTTG GGGTGATCTA TGTGGGTACC CGCTATGCTG ACACGGCAAA CACCCAAAAG
ATGAAGGATT ATATGCTGGT TAACCTGGCC GGTTCCTATG ATCTCACCAA AAACCTGCAG
CTCTTCGGGC GGGTTGATAA CCTGTTTGAC CGCCAGTATG AAGAGGTGGC CGGTTATGGC
ACCCCCGGCA TTGGTGCCTA TGGCGGCGTA AAGGTATCGT TTTAG
|
|---|
| Protein sequence | MKRSRQKYAV ALGLILAVCG SAMAEEKTTQ LGEVVVTATR DEVPIEQVGS SITVVTAKEI
EQQQKRTVAD ALRMVPGLDL VRTDSFGGTT AVFMRGAKSE HTLVLIDGIQ INDPSSTGGG
YNFSNLTTDN IERIEILRGP QSTLYGSHAI GGVINIITKR GDGKLKGFLS AEGGSFATAR
ESAGLNGGND LLQYSLSVSR LDTGGVSAAG ERYGNVERDG YQNTAVAGRL GITPTTNSEI
DLTLRYDRSR TSVDNGGGAG KDDPNHVMKS DELFFRTQGW LSLFNGLWDQ KLGVSFSDIS
WRDDNDRDSA HPNDLLRSSF HGQSVKLDWQ HTLKLHKTTT LVVGAETTEE NGKSDYYSES
MFGPYTSTWD ERFARTTGVY LQDQLNLFDA WFSTLGVRVD DHSKFGTEAT YRFTTAYLIK
QTDTRLKGSY GTGFKAPSLY QLYSSYGSPD LKPDKSIGWD VGVEQGLPFM KTTLGATWFR
NEYSQMIDFD MTTWKYTNVA KAHTHGLELT AALQPVDDLT LKAAYTYLET RDDISGKQLV
RRPKNKASFD INYSFLKKAN INLGVIYVGT RYADTANTQK MKDYMLVNLA GSYDLTKNLQ
LFGRVDNLFD RQYEEVAGYG TPGIGAYGGV KVSF
|
|---|
| |