Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3554 |
Symbol | |
ID | 6367566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3824229 |
End bp | 3826820 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642678969 |
Product | cobyric acid synthase CobQ |
Protein accession | YP_001953775 |
Protein GI | 189426598 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ [TIGR01140] L-threonine-O-3-phosphate decarboxylase [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.235354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGCC AGACCCGGCA GCCGGTACGA CATAGCCACG GCGGCAATCT GCGTGCCTTG AGTCAGGCAG CAGGCCTGCC GCAGGGAGAA CTGCTGGACT TCTCCGCCAA CATCAACCCG CTGGGGCCGC CGGACTGGCT GCGCCCGCTG ATTGAAAGCC GGATCAGCGA TCTGATCCAT TACCCTGACC CGGACGCAAC TGAACTGGTT GAGGCCTTGG CCGCCCTGCA CCGGATTCCG GCTGACCAGA TCCTGGTGGG TAACGGAGCC ACAGAACTGC TGCACCTGCT GCCCCGTGCG CTGGGTTGCT CCTCACTGCT GTTAGCGGTG CCCAGCTATG CCGATTATGA GGAACCGGCC CGGCTGTCCG GTCTGAACAT CGAGCAGTTT TTTCTCTCTC CTGATACCGG TTTTCTGCTT GATCCAACCT GCCTTGTACC GTTCCTGAAA CCAGCCCAGC TGGTGCTGCT GGGCCAGCCC AACAACCCCA CCGGACGCAC CTTTGATGCT GCCAGCCTGC GCCGGATAGC AGCGGAGCAT CCAGCCACCC TGTTTGTGGT GGATGAGTCA TTCATCGGCT TTACCGATGC CAGTCAGAGC CTGCAGCAGA ACCGGCCTGA AAATATCCTG ATCCTGACAT CTTTAACCAA GCTGTATGCC ATTCCCGGCC TGCGTCTGGG CTACCTGACC GGCGCTGCAG CGCATATCCG GCAGCTTAAA AACTATCTGC CCAACTGGAC CGTCAACAGC CTGGCCCAGG CCGTGGGGGT GCGGGCAGTA CAGGATACAG AGTACCTGCA GCACAGCCGC AGCTTTGTGA CAGGGCAGCG GGAAGCTCTT GCGGCGCTGC TGTCCAGCCT GTCGGGCCTG ACAGTCTACC CCGCTGAGGC CAACTTCCTG CTGCTGCGGC TTGATCATCC CACCCTTGCT GCACAGCAGC TTGCTGATCT GGCCCTGCAA CAGGGGATCG CCCTGCGGGT CTGCGGGAAT TTTAGCGGGC TGGATGGCCG CTACTTCCGT CTGGCGGTGC GGACTGAACC GGAGCAGCAG CGGCTCTACA CTGTTTTGCA GAGTATCCTG GCACCATCAC GGCCACGAAT TGTGAAGCGT CAAACCCCGG CGATCATGTT TCAGGGCACC GGCTCCAACG CCGGCAAGAG TATCCTGACC GCTGCGCTCT GCAGGATCTT GAAGCAGGAT GGCTATGATG TGGCGCCGTT CAAGGCCCAG AACATGTCGC TCAACTCCTT TGTGACCCGT GACGGCGGTG AGATGGGACG GGCCCAGGTG CTGCAGGCCC AGGCCTGTCG CCTTGACCCG GACGTACGGA TGAATCCGGT GCTGCTGAAA CCCAATAGTG AGACCGGTTC CCAGGTGATC CTCTGCGGCA AGGCGATTGG CACCACCCAC TTTAAGGACT ATGCAGAGCA ACGGGCTGAG ATCTTTAAAA CAGTACGACG TTGCTACGAT GAACTGTCTG CTGAACATCA GATCATGGTG CTGGAAGGGG CGGGCAGTCC GGCAGAGGTG AACCTGAAGG CCAATGATAT TGTGAATATG AACATGGCCC GCTATGCCCA TGCGCCGGTG CTGCTGGTGG GTGATATCGA CCGGGGCGGC GTGTTTGCCT CCTTTGTGGG GACCATGGAG GTTCTAAGCG AGGCGGAACG GGCCATGGTG GCCGGGTTTG TGATCAACCG CTTCCGGGGC GATGCAAGCC TGCTGGGTGA TGCCTTGGCC TACACCCGCT TTCACACCAA TAAGCCGGTG CTGGGTACCA TTCCCTATCT GCATAACCTG GGCTTGCCGG AGGAGGATTC GGTCTCCTTC AAGCAGGGGT TGCTGGCTGC CGGGGCAAAG GATAGCCAAC TGCTTGATAT TGCAGTGCTG GACCTGCCGC ACATCTCCAA CTTTACCGAC CTTGATCCGT TAGGGCTGGA GCCGGATGTG GGCCTGCGGA TCGTCCGGTC AGTAGCGAAA CTTGGCCAGC CTGATGCCCT GATCCTGGCC GGCAGCAAGA ATACCCTGGC TGACCTGGCC TGGCTGCAAC AGACCGGACT GGCAGCAGCC GTCCTTGAGC TGGCCCAGGC TGGCCAGACT GAGATCATCG GCATCTGCGG TGGTTTTCAG TTGCTGGGCC AGCAGATCAG CGATCCCCAT GCCATTGAAT CCGGGGCTGG GCAACAACAA GGATTGGGGC TGCTGGCGAT CAATACGGTC ATGGCAGAAG AAAAGACCAC CCTGCAGACC CGCTGTTGTC ATCTCACCTC CGGCTGCCTG CTGAGCGGCT ACGAGATCCA CCACGGCATC ACCACTGCAG AAGGGATTGA ACCACTGATC ACCGGACAGG ATGGCAGGCT GCTCGGTGCA GGCAGTGCCA ACGGTCTGAT CTGGGGCAGC TACCTGCATG GGATCTTTGA TGCAGACCCA TTCCGGCGCT GGTTGCTTGA CCGGCTGCGG CAACGTAAGG GTTGGCAGAG CGATGGCCAG ATCCGGACCT GCTATGATCT GGAACCGGCC CTGGACCGCT TGGCGGATAC GGTGCGTAAC AGTCTGGATC TGCGGGAAAT CTATCGGTTG CTGCGGCTAT GA
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Protein sequence | MTGQTRQPVR HSHGGNLRAL SQAAGLPQGE LLDFSANINP LGPPDWLRPL IESRISDLIH YPDPDATELV EALAALHRIP ADQILVGNGA TELLHLLPRA LGCSSLLLAV PSYADYEEPA RLSGLNIEQF FLSPDTGFLL DPTCLVPFLK PAQLVLLGQP NNPTGRTFDA ASLRRIAAEH PATLFVVDES FIGFTDASQS LQQNRPENIL ILTSLTKLYA IPGLRLGYLT GAAAHIRQLK NYLPNWTVNS LAQAVGVRAV QDTEYLQHSR SFVTGQREAL AALLSSLSGL TVYPAEANFL LLRLDHPTLA AQQLADLALQ QGIALRVCGN FSGLDGRYFR LAVRTEPEQQ RLYTVLQSIL APSRPRIVKR QTPAIMFQGT GSNAGKSILT AALCRILKQD GYDVAPFKAQ NMSLNSFVTR DGGEMGRAQV LQAQACRLDP DVRMNPVLLK PNSETGSQVI LCGKAIGTTH FKDYAEQRAE IFKTVRRCYD ELSAEHQIMV LEGAGSPAEV NLKANDIVNM NMARYAHAPV LLVGDIDRGG VFASFVGTME VLSEAERAMV AGFVINRFRG DASLLGDALA YTRFHTNKPV LGTIPYLHNL GLPEEDSVSF KQGLLAAGAK DSQLLDIAVL DLPHISNFTD LDPLGLEPDV GLRIVRSVAK LGQPDALILA GSKNTLADLA WLQQTGLAAA VLELAQAGQT EIIGICGGFQ LLGQQISDPH AIESGAGQQQ GLGLLAINTV MAEEKTTLQT RCCHLTSGCL LSGYEIHHGI TTAEGIEPLI TGQDGRLLGA GSANGLIWGS YLHGIFDADP FRRWLLDRLR QRKGWQSDGQ IRTCYDLEPA LDRLADTVRN SLDLREIYRL LRL
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