| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3540 |
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| Symbol | |
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| ID | 6369490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 3808046 |
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| End bp | 3809374 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642678955 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_001953761 |
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| Protein GI | 189426584 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000247021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATGT TCTGGATCCA ATTCGTGCTG GTACTTGGGG CAGTTTTGAT CGGTATCCGC
CGGGGCGGTG TCTCCCTCGG CCTGATCGGT GGTCTGGGGG TCTCACTGCT GGTGCTGGGC
TTCCGCAGTG CGCCGTCCGA GCCGCCCATT GCGGTGATGC TGATCATCCT GGCGGTGGTG
ACCGCCTCGG CCACCCTGCA GGTGGCAGGC GGGCTTGACT ACCTGGTGCA GCTGACCGAG
CGGATGCTGC GCGCCCATCC CAAGTACGTC ACCATCCTTG CCCCGCTCTC AACCTTTTTA
CTGACCGTCT GCTGCGGTAC CGGCCATGCC GTCTATGCCC TGCTGCCGGT TATCTCCGAC
GTGGCGCTCA AGACCGGTAT CCGTCCGGAA CGTCCCATGG CCATCTCCAG TGTGGCCTCA
CAGATGGGTA TTACCGCCAG TCCGGTTGCA GCCGCCGTGA CCTTCTTTCT CGGCTTTGCC
GCCAAGGCCG GCTATCCGGT CACCCTGGTG GATATCATCA TGGTCACCAT GCCGGCCGGT
GTGCTGGGTG TGCTGGCAGC TGCCGCCTGG AGCTTCAACC GCGGTAAAGA CCTGGATAAA
GACCAGGAAT TTCAGGCCCG CCTGGAAGAT CCCGACTTCC GTAACACCCT GAACGCCAAC
GTCACGACGC TGGACCAGAA GATCTCCACC ACGGCCAAAC TGTCAGTGCT GCTGTTCTTT
GCCGGGGTCG GTTCCATCAT CCTCCTGGCC AGTTTCCCGG AACTGCTCCC CCTTGACCAC
AAAGGCAAGG CAGTGGCCAT GACCACGGTG GTGCAGTTTG TCATGCTGGC CTTTGGCGCC
TTCATCATGT TCGCCGGTAA CGTCAAGGCC AAGGATATCG CCCACTCCAG CGTCTTCACC
GCCGGTATGA TCGCCGTGGT CTCCATCTTC GGTATCGCCT GGATGAGCGA CACCTTTATC
TCCGCCAACA AGGGTTATCT GATCGAGACC ATCGGTACCA TGGTCAAGAC AGCCCCCTGG
ACCTTTGCCA TCGCCACCTT CTGTATCTCG GCCTTTGTCA AGAGTCAGGC CGCCACCCTG
GCCATTACCC TGCCGCTGGG TCTGGCCCTG GGCCTGCCGG TGCCCCTGCT GCTGGGCCTG
ATGCCGGCCA GCTACGCCTA CTTCTTCTTT GCCTTCTACC CCAGCGACCT GGCTGCCATC
AATATGGATC GTACCGGCAC CACCAGAATC GGCAAGTACC TGTTAAACCA CAGCTTCATG
ATCCCCGGCC TGATCGGTGT CAGCACCTCA ACCGTCATAG CCTACATCAT CTCACGCTTC
ATGTTCTAG
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| Protein sequence | MLMFWIQFVL VLGAVLIGIR RGGVSLGLIG GLGVSLLVLG FRSAPSEPPI AVMLIILAVV
TASATLQVAG GLDYLVQLTE RMLRAHPKYV TILAPLSTFL LTVCCGTGHA VYALLPVISD
VALKTGIRPE RPMAISSVAS QMGITASPVA AAVTFFLGFA AKAGYPVTLV DIIMVTMPAG
VLGVLAAAAW SFNRGKDLDK DQEFQARLED PDFRNTLNAN VTTLDQKIST TAKLSVLLFF
AGVGSIILLA SFPELLPLDH KGKAVAMTTV VQFVMLAFGA FIMFAGNVKA KDIAHSSVFT
AGMIAVVSIF GIAWMSDTFI SANKGYLIET IGTMVKTAPW TFAIATFCIS AFVKSQAATL
AITLPLGLAL GLPVPLLLGL MPASYAYFFF AFYPSDLAAI NMDRTGTTRI GKYLLNHSFM
IPGLIGVSTS TVIAYIISRF MF
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