| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3515 |
|---|
| Symbol | |
|---|
| ID | 6366144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3774481 |
|---|
| End bp | 3776025 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642678932 |
|---|
| Product | restriction modification system DNA specificity domain |
|---|
| Protein accession | YP_001953738 |
|---|
| Protein GI | 189426561 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAAATA CCGTGTTTTC TAATGGTTGG TTAACTGTTC CATTAAGTGA TTTGTTAATG
TCACTTGAAA CTGGTAGTAG GCCAAAAGGT GGTGTTAGAG GAATTACTGC TGGCATACCA
AGCTTGGGTG GAGAACATCT GGATTCAAAT GGAGGATTTA AGTTAGATAA CATACGCTAT
GTTCCATTGG AATTTGCAGA ATTAATGACC CGTGGAGCTA TTAACAATGG TGATATTTTA
GTCGTAAAAG ATGGCGCCAC GACTGGTAAG GTTTCGTTTG TAGACAATTC ATTCCCGTTA
AGTATAGCCG TTGTTAACGA ACATGTATTT TTATGTCGCT GCTCATCACT GCTTAATTCT
AAATACATTT TCTTCTATTT GTTCTCAAAT TCAGGAAACC AACAAATTCT TGAGGATTTT
AGAGGGGCGG CACAAGGGGG AATAAGCCAA CGTTTTGCAG ACCTCGTAAA AGTCCCATTA
GCTCCAGCAG CTGAACAAAC GCGCATCGTC GAAAAACTCG AAGAGCTTTT CTCTGATCTT
GATGCCGGAG TAGCCGAACT CAAGGCCGCA CAAAAAAAGC TGGCCCAATA CCGCCAATCG
CTGCTGAAAG CAGCGGTGGA AGGTTCACTT ACTGCTGAGT GGCGTACCAA AAACACACCC
AAAGAAACCG GCGCGCAACT GCTGGAACGC ATCCTGAAAG AGCGCCGTGC CCGCTGGGAA
GAGAAGCAGC TTGCCAGGTT TAAGGAGCAG GCCAAAACCC CGCCCAAAGG ATGGCAGGAC
AAGTATCCCG AACCGGTGCA GCCGGATACC ACCAATCTGC CGGAATTGCC GGAGGGGTGG
GTGTGGGCGA GTGTTGATCA AGTCGGAGAA GTGTTCTTAG GCAAGATGCT TGATAAGACA
AAACACCAAA CTGGTGCAAT GTTACCTTAT TTGCGAAATA TCAGTGTTCG TTGGGGCAGC
ATTGAGACTC ACGATCTTCC TGAAATGTAT TACGAGGAAG ATGAGCTTGA GCGTTACGGC
CTTGCATCTG GGGACGTGCT GGTGTGTGAA GGTGGTGAGC CGGGGCGTGC AGCAGTATGT
GGCAAGGAGC ATGAAAAGTT GAAATACCAA AAAGCACTTC ATCGGGTTAG GCTGTTCAGT
TTATATGAAT CAGATTTACT GGTCTTTTAT CTCGAACACT TAGCTAAAAC GGGTATGCTT
GAACAATATT TTACCGGAAG CACAATTAAG CATTTTACAA AAGAAAGCTT TATAGCGTTG
CCGATACCGC TTCCTCCTAT TTGCGAACAG TCAGAAATCG TAGAGCATCT AAAATTAGCA
ATTCAGTGTG CACAAGAGCA AGATGCCGCA ATTATCCACT CCCTCACCCA AGCCGCTGCC
CAGCGCAAAA ACATCCTCAA ATCCGCCTTC TCCGGCCAGC TTGTACTGCA AGCCCCCAAC
GATGAACCGG CAAGCCTGCT GCTGGAGCGG ATACGGGCAG AGCGGCAGAA GGGTGAATCC
AGCACCAAGA AGCGTAGTAG CCGCAAAAAG GTGGCTAAGC TATGA
|
|---|
| Protein sequence | MTNTVFSNGW LTVPLSDLLM SLETGSRPKG GVRGITAGIP SLGGEHLDSN GGFKLDNIRY
VPLEFAELMT RGAINNGDIL VVKDGATTGK VSFVDNSFPL SIAVVNEHVF LCRCSSLLNS
KYIFFYLFSN SGNQQILEDF RGAAQGGISQ RFADLVKVPL APAAEQTRIV EKLEELFSDL
DAGVAELKAA QKKLAQYRQS LLKAAVEGSL TAEWRTKNTP KETGAQLLER ILKERRARWE
EKQLARFKEQ AKTPPKGWQD KYPEPVQPDT TNLPELPEGW VWASVDQVGE VFLGKMLDKT
KHQTGAMLPY LRNISVRWGS IETHDLPEMY YEEDELERYG LASGDVLVCE GGEPGRAAVC
GKEHEKLKYQ KALHRVRLFS LYESDLLVFY LEHLAKTGML EQYFTGSTIK HFTKESFIAL
PIPLPPICEQ SEIVEHLKLA IQCAQEQDAA IIHSLTQAAA QRKNILKSAF SGQLVLQAPN
DEPASLLLER IRAERQKGES STKKRSSRKK VAKL
|
|---|
| |