Gene Glov_3480 details

Gene Information

• Locus tag: Glov_3480
• Symbol: ispF
• ID: 6367856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 3741211
• End bp: 3741684
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642678897
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001953703
• Protein GI: 189426526
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0555954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATAG GACATGGCTA TGATGTCCAC CGGCTGGTGG AAGACAGAAA ACTGATTATG 
GGTGGAGTGG ATATCCCCTG GGAAAAAGGG CTGCTGGGCC ATTCCGATGC CGATGTACTG 
CTGCATGCCA TAGCGGATGC CCTGCTGGGT GCCCTGGCTA TGGGCGATAT CGGCAAGCAC 
TTCCCTGATA CCGACCCGGC CTTCAAGGGA GCTGATTCCA TGAAACTGCT GGAGCATGTG 
GTGGGCCTGA TCAGGACACA GGGATATGCT GTAGGCAACC TGGATGCTAC CATCATTGCC 
CAACGGCCTA AGATGGCACC CCATATCCAG GCCATGCGGG AGAACGTTGC TCGAGCCTGC 
GGTGTAGAGG TAGACCGGAT CAATGTCAAA GCCACCACAG AGGAAGGTCT GGGCTTTACC 
GGAACCGGCG AGGGAATCTC GGCCCATGCC GTGGTGCTGC TGATTCCACA ATGA 

 

Protein sequence

MRIGHGYDVH RLVEDRKLIM GGVDIPWEKG LLGHSDADVL LHAIADALLG ALAMGDIGKH 
FPDTDPAFKG ADSMKLLEHV VGLIRTQGYA VGNLDATIIA QRPKMAPHIQ AMRENVARAC 
GVEVDRINVK ATTEEGLGFT GTGEGISAHA VVLLIPQ