| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3434 |
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| Symbol | |
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| ID | 6366944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3690110 |
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| End bp | 3693277 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642678852 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001953658 |
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| Protein GI | 189426481 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0847845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGGT TTTTTATAGA TAGACCGATT TTTGCCTGGG TCATTGCCAT TCTGGTGATG
CTGGCCGGCC TGCTGGCAAT CAAAACGTTG CCGGTTTCAC AATATCCGCC CATCGCGCCG
CCCCAGATTA CCATTAACGC CGTCTATCCG GGTGCCTCTG CCCAGACCGT GCAGGATACC
GTCACCCAGG TGATCGAGCA GAAACTGAAC GGCATCGACA ACCTGATCTA CATGTCCTCC
ACCAGCGACT CGGCCGGTGC GGTGTCGATC AACCTGACCT TCAAGGCCGG TACCGATCCC
AATATTGCTC AGGTGCAGGT GCAGAATAAG CTGCAGCTGG CTACACCGCT GCTGCCGCAG
GTGGTGCAAA AGCAAGGAAT TCAAGTTGTT AAGTCCACCA AAAACTTCCT GCTGATCGTC
GGCCTGATCT CAGAAGACGG CTCGATGGAC CGCCACCAGC TGACCGACTA CATGGTCTCC
AACCTGCAGG ATATTGTCAG CCGGGTGGAG GGGGTGGGCG AACTGCAGCA GTTCGGTACC
CAGAACGCCA TGCGGATCTG GCTGAATCCG TCAAAGCTGA ATAGTTATCA GTTGACCAGC
AGTGATGTCG TCACCGCCCT GCAGGCCCAG AACGCCCAGG TCTCGGCCGG CCAGTTCGGC
GGCACTCCCT CGAACGAAGG ACAACAGTTG AACGCCACCA TTACGGCGCG GACGCTGCTG
CAGACGGCCG AACAGTTTGA TGCGGTTATC CTGCGTACCA ATCCGGATGG GTCCACGGTG
CGGCTGAAGG ATGTTGCCGT CAGTAAGATC GGTACGGAAA ATTACGACAT CGTGGCCCGC
TACAAAGGCA AACCGCTGGC AGGTATGGCG ATCCGTCTGG CAGCCGGGGC CAATGCCCTG
GATACCGCAA ACCGGGTCAA GGCAAAGATG ACGGAACTGT CAAAGTTTTT CCCGGCCGGC
ATGCAGGTGG TCTATCCCTA TGACACCACC CCGTTTGTCA AGATTTCGAT CGAAGAGGTG
GTGCATACCC TGGTGGAGGC GGTGCTGCTG GTCTTCATCA TCATGTTCCT GTTCCTGCAG
AATATCCGCG CCACCCTGAT TCCCACCATT GCCGTGCCGG TGGTGCTGCT GGGTACCATG
GGGGTCTTGT CGGCCGCCGG ATTCTCGATC AACACCCTGA CCATGTTTGC GCTGGTCATC
GTGATCGGTC TGCTGGTGGA TGACGCCATC GTGGTGGTGG AAAACGTGGA GCGGATTATG
TCCGAAGAAG GATTGTCGCC TCACGACGCC ACTATCAAAT CCATGGGCCA GATCACCAGC
GCCCTGGTGG GTATCGCCAC GGTACTGTCG GCGGTCTTCC TGCCGATGGC CTTCTTTGGC
GGCTCCACCG GCGTGATCTA CCGCCAGTTT TCAATCACCA TCATCGCGGC CATGATCCTG
TCGGTGTTGG TGGCCCTGAT TCTAACGCCG GCACTCTGCT CAACGCTGTT GAAGCCGGTT
GAAAAGGGGC ATGAACCGGG TGAGTGCGGG CCGTTCTGCA AATTCTTCCG TTGGTTTAAC
CGCAAATTTG ACTGGGCCAG AGGGAAATAT GAGGGAATTG TCGGACGCTC ATTCAACAAG
CCGATCCGCT ATCTGGTGGT GTACGGCTGC ATCGTGGCAG CCATGATGCT TTTCTTCCAC
CGTCTCCCGA CTGCCTTCCT GCCGGATGAA GACCAGGGCT TTATCATCTG CCAGGTGCAG
CTGCCTGCCG GGGCTACCCA GGAGCGAACC CTGAAGGTGG TCGAGCAGCT TGAGCAGCAT
TTTCTTGAAA AGGAAAAGAA GACGGTTGAG GCGATCATCA CCGTGGCCGG CTTCAGCTTT
GCCGGTAGTG GGCAGAATAT GGGCCTGGCC TTTGTCAAAT TGAAGGACTG GAAGCTGCGT
CCAACCAAAG ATATGAAGGC GCCAGCCGTT GCCGGTCGCG CAATGGGGGC TTTCTCAAAG
ATCAAGGATG GCCTGGCCTT TGCCTTTTCA CCACCGGCGG TGGTGGAGTT GGGGCAGGCC
AACGGTTTTG ACTTCCAGCT GCAGGATCGC GGCGGTCTTG GCCATGATAA ACTGATGGAG
GCCCGCAACA TGCTCTTGGG CATGGCCATG CAGAACAAGA AGCTGGTGGC GGTACGTCCC
AACGGGCAGG ATGATTCACC CCAGTTCAAG CTGGATATTG ATGATGTCCG GGCAGGTGCA
TTGGGGGTCT CTCTTGCCAG CATCAACGAA GTGTTGGCTA CGGTCTGGGG CAGTTCCTAT
GTCAACGACT TTATCGAAAA TGGCCGGGTC AAGAAGGTCT ACCTGCAGGC CGATGCCAAG
TACCGGATGT TGCCTGAGGA TATCGGTAAA TGGTATGTGC GCAATGATAA AGGGGATATG
GTTCCGTTCT CGGCCTTTGC CACGGCCCGC TGGCAGTACG GTTCGCCCCG TCTTGAACGT
TACAACGGTA TTCCGTCGGT TGAGATCATG GGGCAGGCAG CTGCCGGGAT CAGTACCGGA
GAGGCGATGG CCGAAATGGA AAAGATGGCG GCCAAACTAC CGTCCGGTAT TGGCTATGAA
TGGACCGGCC TTTCCTATGA AGAGAAAAAC GCCGGGGCGC AGGCGCCCGC GCTTTACGCC
ATCTCGCTCC TGGTGGTGTT CCTGGCAGTA GCGGCCCTGT ATGAAAGCTG GACCATCCCA
TTTGTGAACC TGTTGATGCT GCCGCTGGGG CTGGTGGGTG CGGTGACTGC GGTGACCTTG
CGTTTGCTGC CCAACGACGT CTATTTGCAG ATCGGATTGC TGACCACGGT GGGGCTTTCC
ACCAAGAACG CGATCCTGAT CATCCAGTTT ATCAAGGAGC AGCTGCATCA GGGGCATGAA
CTGGTTGATG CGACCCTGTC GGCAGTCAAG ATCCGGCTGC GTCCGGTTAT CATGACCTCG
CTGGCCTTCT TCTTCGGCAC CCTGCCGCTG GCGTTGACCA AAGGGGCGGG GGCGGCCGCC
CAGAACGCCA TCGGCACGGC GGTAACCGGC GGTCTGTTGT CCGCCACCTT TATTGACCTG
ATCTTTATTC CGTTTTTCTT TGTGATGGTA TCGCGCTTGT TTGGGCGGAA GAAGTACAAA
AAGGATGCGG GCCATGCACT GCCGACTGCT GTACAGGAGG GGCACTGA
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| Protein sequence | MARFFIDRPI FAWVIAILVM LAGLLAIKTL PVSQYPPIAP PQITINAVYP GASAQTVQDT
VTQVIEQKLN GIDNLIYMSS TSDSAGAVSI NLTFKAGTDP NIAQVQVQNK LQLATPLLPQ
VVQKQGIQVV KSTKNFLLIV GLISEDGSMD RHQLTDYMVS NLQDIVSRVE GVGELQQFGT
QNAMRIWLNP SKLNSYQLTS SDVVTALQAQ NAQVSAGQFG GTPSNEGQQL NATITARTLL
QTAEQFDAVI LRTNPDGSTV RLKDVAVSKI GTENYDIVAR YKGKPLAGMA IRLAAGANAL
DTANRVKAKM TELSKFFPAG MQVVYPYDTT PFVKISIEEV VHTLVEAVLL VFIIMFLFLQ
NIRATLIPTI AVPVVLLGTM GVLSAAGFSI NTLTMFALVI VIGLLVDDAI VVVENVERIM
SEEGLSPHDA TIKSMGQITS ALVGIATVLS AVFLPMAFFG GSTGVIYRQF SITIIAAMIL
SVLVALILTP ALCSTLLKPV EKGHEPGECG PFCKFFRWFN RKFDWARGKY EGIVGRSFNK
PIRYLVVYGC IVAAMMLFFH RLPTAFLPDE DQGFIICQVQ LPAGATQERT LKVVEQLEQH
FLEKEKKTVE AIITVAGFSF AGSGQNMGLA FVKLKDWKLR PTKDMKAPAV AGRAMGAFSK
IKDGLAFAFS PPAVVELGQA NGFDFQLQDR GGLGHDKLME ARNMLLGMAM QNKKLVAVRP
NGQDDSPQFK LDIDDVRAGA LGVSLASINE VLATVWGSSY VNDFIENGRV KKVYLQADAK
YRMLPEDIGK WYVRNDKGDM VPFSAFATAR WQYGSPRLER YNGIPSVEIM GQAAAGISTG
EAMAEMEKMA AKLPSGIGYE WTGLSYEEKN AGAQAPALYA ISLLVVFLAV AALYESWTIP
FVNLLMLPLG LVGAVTAVTL RLLPNDVYLQ IGLLTTVGLS TKNAILIIQF IKEQLHQGHE
LVDATLSAVK IRLRPVIMTS LAFFFGTLPL ALTKGAGAAA QNAIGTAVTG GLLSATFIDL
IFIPFFFVMV SRLFGRKKYK KDAGHALPTA VQEGH
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