| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3418 |
|---|
| Symbol | |
|---|
| ID | 6366972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3673983 |
|---|
| End bp | 3675104 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642678837 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001953643 |
|---|
| Protein GI | 189426466 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCG CCAATATCCT GCACCTGGGT GTCAAAGAAC TGCGCAGCCT GCTGGGCGAC
CCGATGCTGC TGACACTGAT TGTGTATGCC TTCAGCTTTG AGGTCTATTC AGCTGCCAAG
GCGATGCCTG AAACACTGCA CAAGGCACCG ATTGCCATTG TTGACGAGGA CCGTTCGCAA
CTCTCGATCC GTATTGCCGA TGCCTTTATC GCCCCGCATT TCAATCCACC GGCGATGATT
ACGCGTACCG AGATGGACAG ACGCATGGAT GCCGGTCTCG ATACTTTTGC TATCAATATT
CCTCCAAACT TCCAACGGGA TGTCCTGGCC GGTCGCTCAC CGGCCATTCA ACTTAATGTG
GACGCCACCC GGATGAGTCA GGCCTTCACC GGCAGCGGCT ACATCCAGTC CATCATTACC
ACTGAAACAA GCGCCTTTCT GCAAGGCCAC CGAGCCGACA CTGTTGCGAC TGTCGCACTG
AACCTCCGGG CGCGCTTCAA CCCCGAATTG AACCAGTTCT GGTTCGGTTC GGTGATGCAG
ATTATCAATA GTGTTACCAT GCTTTCCATT ATCCTGACCG GTGCGGCCCT GATTCGTGAG
CGGGAGCATG GCACGGTGGA ACATCTGCTG GTGATGCCGG TTACCCCGTT CGAGATCATG
GCTGCCAAGG TCTGGGCCAT GGCATTGGTG GTGCTGACAA CCACTGCCTG CTCGCTGACC
CTGGTTGTCC AGGGATTGCT CAGGGTGCCT ATCGAAGGTT CCGTCACCCT CTTTCTGGTC
GGCACCGCCC TGCACCTGTT TGCCACCACC TCTCTTGGTA TCTTCCTCGG TACCATCGCC
CGCTCCATGC CGCAGTTCGG CCTGTTGATG ATGCTGGTGC TGCTGCCGTT GCAGATTCTT
TCTGGCAGCA CCACGCCGCG CGAAAGCATG CCAGACGCTG TCCAGTGGAT CATGCTGGCT
GCACCGAATA CACATTTCGT CATATTGGCG CAGGCCATTC TGTATCGCGG AGCTGGACTG
GCGGTGGTCT GGCCCCAGTT AATCTCCCTG GCCCTGATCG GCTCCCTCCT GTTCAGTCTT
TCGCTGGCCC GTTTCCGCAA GACCATCACC ACCATGGTCT AG
|
|---|
| Protein sequence | MRAANILHLG VKELRSLLGD PMLLTLIVYA FSFEVYSAAK AMPETLHKAP IAIVDEDRSQ
LSIRIADAFI APHFNPPAMI TRTEMDRRMD AGLDTFAINI PPNFQRDVLA GRSPAIQLNV
DATRMSQAFT GSGYIQSIIT TETSAFLQGH RADTVATVAL NLRARFNPEL NQFWFGSVMQ
IINSVTMLSI ILTGAALIRE REHGTVEHLL VMPVTPFEIM AAKVWAMALV VLTTTACSLT
LVVQGLLRVP IEGSVTLFLV GTALHLFATT SLGIFLGTIA RSMPQFGLLM MLVLLPLQIL
SGSTTPRESM PDAVQWIMLA APNTHFVILA QAILYRGAGL AVVWPQLISL ALIGSLLFSL
SLARFRKTIT TMV
|
|---|
| |