Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3385 |
Symbol | |
ID | 6369461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3636344 |
End bp | 3638875 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642678805 |
Product | Radical SAM domain protein |
Protein accession | YP_001953611 |
Protein GI | 189426434 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACAG ACCACTATCT TCAACTAGTG ATGTCCCGTA TGGCTAATGC TATTAGAACC TGCCGAGATC ATCGTACACT GACACTTATC AAGAAGCACG CTGCTGCCTT GATCTCGCTA TTGCATGATG CGCAAGGCAT TGATCTGTGC CCGAATACGG TAGTTACAGA TTTGGCGGAA AAGACGTTTT TACAGTCACT GGCTGTAGAT GTGTCTCCAT CCCCTCCGCC GGGATGGCAG GCTTATTTTG ATGCTTACTT GGGGGTTGAT GGGGGATGTC CTGGCGGTGA AGCTGCGATT CCATCGCTTG TGAACATACC GACCTATTCA TATGGTGACG AATTTTCAGG TATTATCTGT CCCAATCCGT TTCTTTATCT TGAACTCCAC ACCAATGGTG ATTTGTCTCC TTGCTGTTAT CTTCCCTTTT CCATAGGGAA TATCCGCCAG CAGTCTTTAG AGGAAATATG GCATTCTCCT GTGGCTCGTG TCTTGCGCCA ATCGATTAAA GACGGTAGTT ATCGCTACTG TGACAAGCGT AAATGCGCAG GCATGCAGAA GATAGGTCTA GGAGAATATC GGAACAGTAC CGCCTATCAG ATCCCCTACG AATTATTCTG CTCTTCCGAG CTTATCTCGA GGGGGCTCAA CTTTATGGTT GAAGATGCCC TTGAGGGTAG AGTGCCTCGT ATTGTTTCCT TTGATGATGA TCCTACCTGT AATCTGGCGT GTCCTTCGTG TCGGACATCG CTTTATGTAG CTTCGCCTCA GGAGGCTGCA ACAACCTATT CCCAAGATAT GGCTGTTTTG GATGCAATAC CCTTGGGAGT TGAGGAACTT TGGTTTTCTG GTGCCGGTGA TCCTCTCGCC AGCTCAGTAT ATCGCAGGAT TTTTGCTGAA TTTGATTGGA ACAGATATCC AACAATCCGA ATCAGAATTG ACACCAATGG CATGTTGCTG ACAGAGGGGA GTTTTTCTGC CGTCCTTTCG AGAGTTGTTG ACAAGATATT CCTGATTGCG ATTTCCGTTG ATGCTGTAAC CCCAGAAAGT TATGAAATAA TTCGAAAAGG TGGTGTTTTT TCGCGTTTGT TATCCAATTT GGAGGGGCTT GCCAAGTCGG AATATAGAAA GCATATGCAG ATTGTACTGC GTATGATTGT GCAGGTCAGC AATTTCAAAG AGATGGGTGG TTTTGTAGAG CTTGGTAAAA GTTTGGGAGT CGATACGGTA GCCTTTTCAG CCATCTCTAA TTGGGGGACC TTTCTGGAAG ATGACTTCAA GCAGGTTGCT GTGCATACAC CCGATTCTGT TGAGCATCAT GCCTTCTTGC AAACATTGCT TGATGTGAGA CTCAGGGACC CGATTGTTGA TATGGGTAAC CTTACGGCAC TGTTTCATAA TAATCTGACA AAGCATCTAA AAGAGCAGAT TGATGTCCGT GATGTTGTAC ATTCAGGAAC AATCCTGCCT TTGGGGAAGC GTGCGTTAGC AATCGCTTTC TATCTCCCCC AGTTTCATCC GATCCCCGAA AACGACAGAT GGTGGGGCAA AGGTTTCACG GAATGGACCA ATGTAGGTAA AGCGGTCCCT CTCTTTGAAG GACATTATCA GCCTCATGTT CCTGCTGATT TGGGTTATTA TGACCTTAGA GTGCCGGAAA TACGGCTAGA ACAAGCTGAA ATGGCGCGTC GTTATGGTGT TGACGCCTTC TGTTACTGGC ATTACTGGTT TGCCGGACAC CAGCTTTTGG AGCGACCATT TGATGAGGTC GTGCGGACAG GACAGCCTGA CTTCCCATTC TGTCTTGGTT GGGCTAACCA AACCTGGTCA GGTATATGGC ACGGGGCACC GGATCGTGTG TTGATAGAAC AGACTTACCC TGGGCTTGAG GATTATAAGG CGCACTTCGA TACACTACTG CCGGCATTCC GGGATCCGCG TTATCTAAGA GTGCATGACA GGCCACTGTT TGTAATTTAT GCTCCAACCA ATCTGCCGGA CGCTTGTCTC TTTACCTCAT ATTGGCAGCA ATTAGCCCAG GAAGCCGGTT TGGGCGGTAT ATACTTTGTG GCTCATAACG TGCGCAATCC TGAAACGTAT GGCTGCCAGG CCTGTGTTGA TAATGCGCCG TTTGTCTCCA TGAATGCACC TCTGGTGCCT GTCATTCCCC TTTCTGGCAA TTCCGTTCCC AAGGTGTCTC GCTATGAGGA CTTGGTGCTG TATTTGAAAC AGTACCAGTT GTCAGATAAT GAATACCCAC TGGTAGTGCC TAACTGGGAT AATACACCAC GTAGCGGCAG TAACGGTTTT GTGCTGCAAG GCTCCACGCC CGAGTTGTTT GGAGAGATGC TGGAAGATGC CCTGCGGAAG GTTGAGCAAA GAAAAGACCC TGCTGATCGA ATCGTTTTTA TCAAGGCCTG GAATGAATGG GCTGAAGGTA ACCACTTGGA ACCTGATTTG CTCCATGGTC ATGCTTATCT GCAGGCGCTG TATAAAGCAC TGCTTCATGG TGCTTCCAGA CACAGCAGTT GA
|
Protein sequence | MNTDHYLQLV MSRMANAIRT CRDHRTLTLI KKHAAALISL LHDAQGIDLC PNTVVTDLAE KTFLQSLAVD VSPSPPPGWQ AYFDAYLGVD GGCPGGEAAI PSLVNIPTYS YGDEFSGIIC PNPFLYLELH TNGDLSPCCY LPFSIGNIRQ QSLEEIWHSP VARVLRQSIK DGSYRYCDKR KCAGMQKIGL GEYRNSTAYQ IPYELFCSSE LISRGLNFMV EDALEGRVPR IVSFDDDPTC NLACPSCRTS LYVASPQEAA TTYSQDMAVL DAIPLGVEEL WFSGAGDPLA SSVYRRIFAE FDWNRYPTIR IRIDTNGMLL TEGSFSAVLS RVVDKIFLIA ISVDAVTPES YEIIRKGGVF SRLLSNLEGL AKSEYRKHMQ IVLRMIVQVS NFKEMGGFVE LGKSLGVDTV AFSAISNWGT FLEDDFKQVA VHTPDSVEHH AFLQTLLDVR LRDPIVDMGN LTALFHNNLT KHLKEQIDVR DVVHSGTILP LGKRALAIAF YLPQFHPIPE NDRWWGKGFT EWTNVGKAVP LFEGHYQPHV PADLGYYDLR VPEIRLEQAE MARRYGVDAF CYWHYWFAGH QLLERPFDEV VRTGQPDFPF CLGWANQTWS GIWHGAPDRV LIEQTYPGLE DYKAHFDTLL PAFRDPRYLR VHDRPLFVIY APTNLPDACL FTSYWQQLAQ EAGLGGIYFV AHNVRNPETY GCQACVDNAP FVSMNAPLVP VIPLSGNSVP KVSRYEDLVL YLKQYQLSDN EYPLVVPNWD NTPRSGSNGF VLQGSTPELF GEMLEDALRK VEQRKDPADR IVFIKAWNEW AEGNHLEPDL LHGHAYLQAL YKALLHGASR HSS
|
| |