| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3328 |
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| Symbol | |
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| ID | 6367713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 3563944 |
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| End bp | 3566841 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642678748 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001953554 |
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| Protein GI | 189426377 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.928447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGG CATCTGACTG CTATACACAG ATAGTTGAGG CATTACCGAC ACCAATTCTG
CTCCTCAGGC ACAATGGCGT CATACTGCAC GCCAACGCCC CCGCCGCCTG TCTGCTGGAA
ACCCTTGAAG GCATTATCCC CCAGCCGGAA ATAACCCTGG CTCCGCATTG GATCATGGAA
GAGCTTGAGT GTTACCACTC ACAGGGCCTG CCTTCCCACC AAGCAGAAAA AAGTCTGATC
AGCACCACCA ACAGCCATTC CTTTGTCCTG ATCAGCATTA AACGCCTGCG CCCCGACAAC
GACAATCTGC TGCTGGTCAC CATCAACGAT CTTTCCAAAC TGCATCTGGT TGAAGACGGC
CTGCGTCAGC TGGTGGAAGG GATCTCCGAG GCCACCGGTG AAAAATTTTT CCAGTTCCTG
GCCTTGCATC TGGCAAAGGG TCTGGATGCC GATTTTGCCT TTATCGGTGA GTTTGCCGAT
AGCGAGCGCA CCATCATCCA GACCGTGGCG GTTGCTGCCG ATGGCGCCAT ACATGCCAAC
TTCCGGTTCC CGCTTGCGGA GACCCCCTGC GAACAGGTAC TGACCAACGG CCTGCGGATC
TACCCCAAAG CGATCCCCGA GTTATTCCCG CTTGATCATC TTGCCCTGGA GATGGGTGTT
GAGAGCTATA TCGGCATCCC GCTCGTCAGC TCCCGCAGGA TAACCCTGGG ACCGATGGCG
GTCTTCAGCC GGCGTCCGAT CAGAGAGACC CACTTGGCCG CATCCATGCT GCAGGTATTT
GCCGTACGGG CAGCCTCGGA ACTGGAACGC CGCCAGGCGG AACGGGTCCT GAAAGAGACA
GAGGCACGTC TTAAGACCAT TGTTGATTCG GTCCATACCG GTATTCTGGT GATTGATCCT
GAAAACCACC GGATCGTTGA TGTCAATGAG CTGGCTGCCA GCAGCCTCGG CAGAACACGC
GAAGAGATGA TCGGCACTTC ATGCCATCGC TTCATCTGCC CCAATGAGGA AGGGCGCTGC
CCCATCACCG ACCTGCAGCA GGAGCTGGAC AATGAAGAGC GTGATCTGAT CCGGGCTGAT
GGCAGCCGCC TGCCGGTGAT CAAGACCGTC AGTCGTGTCG TGCTGGATGG GCGAGAGCAT
CTTCTGGAAA GCTTTGTCGA CATCAGCAGG CGCAAACAGG TGGAGAACAG CCTGAAGGAA
AGTGAAGAGC GCTATCGAAT GCTGGTTGAA AACCAGGCAG ACCTGGTCAT CAAGACCGAT
ATGACAGGCA ACCTGCTCTT TGTCAGCCCC TCATTCTGCA AACTTTTCGG CCAGACCGAG
GAAAAACTGC TCGGCAAAGC GCTCTTGCCG GTCATCATGT TGCCTGAGCA GCTCGCCACA
GCCGCTGGGA TGGAGCAGAT GATCTGCAGT GATACCAGCT ATTACCGCGA GTATCTCTCT
CCGACACGGG AGGGCAAGCG CTGGATCGGC TGGGCGTTGC GCTGCATCTT CAACCAGTCC
GGTCAGGCAG AGGCGATTAT CGGTATGGGG CGGGATATTA CTGATCGCAA AACAGCTGAA
AGCACCATTG AGCAGTTGGC CTACCATGAC CCGGTCACCG GCCTGCCGAA CCGGACGCTG
CTGCATGATC GTCTTCAGCT GGCAATCAAC CGTGCTGAAC GGGACAGCCA GGGTGTGGCG
ATCCTGTTTC TTGACCTGGA TCGTTTCAAG GCAATTAACG ATTCACTGGG GCATGCCATG
GGCGATCAGC TACTGCGCCT GGTCGGCAAT CGGCTGCTTG ACTGTGTTCG TTCATCGGAT
ACAGTGGCCC GCCTAGGGGG TGATGAGTTC GTAGTGTTGA TTTCAGCCCT TGATAATGAC
CATGCCGTGG GCAGCGTGGT CATGAAGATC CTGGAGCAGC TGTGTGAGCC GTACCAGATT
GACGATCATG AGGTCTACAC CTCTTCCAGT ATCGGCATCT CACTCTTTCC CCGTGATGGC
CGCGATGCCG AAGAACTGTT GAAAAATGCC GACATGGCCA TGTACCAGGC CAAAGAGGCC
GGTCGTAACA CCTGCCACTT CTTCTCACCG GAGCTGAACA TGCGGGCGAC TGAACGGTTG
CTGCTTGAGA GCACCATGCG CCGGGCCCTG GAACGGGAGG AATTTTTTCT GGTCTATCAG
CCCCAGATGG AGTTACGCAG CGGACATATT GCGGGGATCG AGGCATTGCT GAGATGGCGG
CATCCAGATC TGGGGGTTGT GCCGCCAAAC AATTTTATTC CAATTGCAGA AGAAACCGGC
CTGATTGTGC CGTTGGGGGA ATGGGTACTG GCCGAGGCCT GCCGGCAGGC GGTGCGCTGG
CAACAGGAGG GGCAACCCCC GCTGCGGATG GCGGTGAACG TTTCTGCCCG TCAGTTTCGC
CAACGCAACC TCGGCCTGCG GATCGAAAAA ATCCTGATGG AAACCGGCCT TGACCCTGCA
TTGCTGGAGC TTGAGCTGAC TGAAAGCGCA GTCATGGAAA ACCCGGAAGA AGCGATCCTG
ACCCTGCGTC AGCTGAAAAA GATGGGGATT ACTCTCTCCA TCGACGACTT CGGCACCGGC
TACTCATCAC TGTCACATCT CAAACACTTT CCGATCGACC GGCTCAAGAT CGATCGTTCC
TTTGTCAAGC ATGTCACCCG GGACCACAAT GACGCCACCA TTGCCGAGGC GATCATCGCC
CTGGCCCACA GTATGAAGCT GACGGTTGTT GCCGAGGGGA TCGAACACAG TGAGCAGATG
GAGTTTATGC ACCAGCGTCA CTGCGACACC ATGCAGGGCT ACTACCTGTC GCGACCGGTA
ACCGCCGAGG AGTTCGGCAC GTTTCTCAAA AGGCTGGGGG AATCGGACGG CAAGGCCCAT
GGTCTGCTGG GAGGATAA
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| Protein sequence | MEQASDCYTQ IVEALPTPIL LLRHNGVILH ANAPAACLLE TLEGIIPQPE ITLAPHWIME
ELECYHSQGL PSHQAEKSLI STTNSHSFVL ISIKRLRPDN DNLLLVTIND LSKLHLVEDG
LRQLVEGISE ATGEKFFQFL ALHLAKGLDA DFAFIGEFAD SERTIIQTVA VAADGAIHAN
FRFPLAETPC EQVLTNGLRI YPKAIPELFP LDHLALEMGV ESYIGIPLVS SRRITLGPMA
VFSRRPIRET HLAASMLQVF AVRAASELER RQAERVLKET EARLKTIVDS VHTGILVIDP
ENHRIVDVNE LAASSLGRTR EEMIGTSCHR FICPNEEGRC PITDLQQELD NEERDLIRAD
GSRLPVIKTV SRVVLDGREH LLESFVDISR RKQVENSLKE SEERYRMLVE NQADLVIKTD
MTGNLLFVSP SFCKLFGQTE EKLLGKALLP VIMLPEQLAT AAGMEQMICS DTSYYREYLS
PTREGKRWIG WALRCIFNQS GQAEAIIGMG RDITDRKTAE STIEQLAYHD PVTGLPNRTL
LHDRLQLAIN RAERDSQGVA ILFLDLDRFK AINDSLGHAM GDQLLRLVGN RLLDCVRSSD
TVARLGGDEF VVLISALDND HAVGSVVMKI LEQLCEPYQI DDHEVYTSSS IGISLFPRDG
RDAEELLKNA DMAMYQAKEA GRNTCHFFSP ELNMRATERL LLESTMRRAL EREEFFLVYQ
PQMELRSGHI AGIEALLRWR HPDLGVVPPN NFIPIAEETG LIVPLGEWVL AEACRQAVRW
QQEGQPPLRM AVNVSARQFR QRNLGLRIEK ILMETGLDPA LLELELTESA VMENPEEAIL
TLRQLKKMGI TLSIDDFGTG YSSLSHLKHF PIDRLKIDRS FVKHVTRDHN DATIAEAIIA
LAHSMKLTVV AEGIEHSEQM EFMHQRHCDT MQGYYLSRPV TAEEFGTFLK RLGESDGKAH
GLLGG
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