| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3323 |
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| Symbol | dapF |
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| ID | 6365812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3555304 |
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| End bp | 3556140 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642678743 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001953549 |
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| Protein GI | 189426372 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA CCAAGATGCA TGGTGCTGGC AACGATTACG TGTATGTGGA CTGTTTCAAG
GAGACCGTGG ATAATCCTGC TGAAACAGCG ATCAAGGTTT CAAATCGCAA CTTCGGGATC
GGCTCTGACG GCCTGATCCT GATCATGCCC ACTGATAAGG CCGATGTGCG GATGCGGATG
TTCAACAGCG ACGGTTCCGA GTCGGAGATG TGTGGTAACG GTATCCGCTG TGTGGCCAAG
TACGCGTATG ATCATGGTAT TGTGACCAAG ACCGAGATTA CGGCCGAAAC CGGTGCCGGT
ATCCTGACCC TGCAACTGTT CCCCAATGCA GAGAACAAGG TGGAGCGGGT ACGGGTCAAC
ATGGGACCGC CACGGCTTTC CCGTGAAGAG ATCCCGATGA ACGGCACGCC GGCTGCCCAG
GTGGTGGCTG AAGAACTGAC GGTGTTGGAC AAGACCTTCA AGATCACCTG TGTCTCCATG
GGTAACCCCC ACTGCATTAT CTATGTGGAT GACGTGGACA ACTTTCCGGT GGCCACCTAC
GGCCCGTTGA TCGAGAACCA CCAGCTGTTT CCCCGCCGTA CCAACGTGGA GTTTATTCAG
ATTATCTCCC GCACTGAAGT CAAGCAGCGT ACCTGGGAAC GTGGTGCAGG CGAGACCCTG
GCCTGCGGCA CCGGTGCCAG CGCGGTCTGC GTGGCAGGTG TGTTGAACAA CCTGACCGAC
CGCAAGATCC TCAACCATCT GGCTGGCGGT GACCTGGAGC TGGAGTGGGT TGAGAACGGG
CCGGTGTTTA TGACCGGTCC GGCAACGGAA GTGTTTTCTG GTGAGATTGC GTTGTAG
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| Protein sequence | MKFTKMHGAG NDYVYVDCFK ETVDNPAETA IKVSNRNFGI GSDGLILIMP TDKADVRMRM
FNSDGSESEM CGNGIRCVAK YAYDHGIVTK TEITAETGAG ILTLQLFPNA ENKVERVRVN
MGPPRLSREE IPMNGTPAAQ VVAEELTVLD KTFKITCVSM GNPHCIIYVD DVDNFPVATY
GPLIENHQLF PRRTNVEFIQ IISRTEVKQR TWERGAGETL ACGTGASAVC VAGVLNNLTD
RKILNHLAGG DLELEWVENG PVFMTGPATE VFSGEIAL
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