Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3208 |
Symbol | |
ID | 6365954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3429786 |
End bp | 3430442 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642678625 |
Product | transcriptional regulator, TraR/DksA family |
Protein accession | YP_001953434 |
Protein GI | 189426257 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1734] DnaK suppressor protein |
TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000145805 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCA CCAAGCCCGT AAAGAAAACA ACTCAGGAGC CTTCTGCGGC TTCCAAGAAG CCCGCTGCAC CGGCACCTGC CAAGGCACCT TCCAAAGAAG CCGCCGAGAC CGCACCGGTA AAATCCGAGG CAAAGCCTGC TGACAAAGCA GCCGAGCCAA AGAAAAAAGT GGCGACCGTT CCAGCCGAAC CGTCAGTACC GCCCACGGCC AAAACAGTGG AAGCGTCTGT TGCTTCAGGG GGCAAATGGA AGGAGATCCA GCAGATTCTC CTGGCCATGA AAGAACAGAC TCTGCTTGAA ATAAAGCGCT CGATCAAAAA GGGCTCGGAG GTGTCAGTCG GCGAGGAACC GACCGGTGAT ATCTACGATC AGGCCTCATC GGAGCGGGAC CGAGAGCTTG GTCTGCTTCT GAACGACCGT GAGCGGGAAA AACTGCATAG CATTGACGAA GCACTGCTGC GGATTGCCGA AGGCGAGTAC GGCATCTGCG AAGAGTGCGA CGAAGATATC CCGATGGGGC GCCTGAAGGT GCTTCCCTTT ACCCGTCACT GCGTCAAGTG CAAATCTGAC CTGGAAAAGT TCCAGGCCCA GACCCGCCGG ATAGAAGAGG ATCGGGCCTA TCGCGAGATA CCGGTCGGCG ACGACGACGA GGGCTAA
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Protein sequence | MATTKPVKKT TQEPSAASKK PAAPAPAKAP SKEAAETAPV KSEAKPADKA AEPKKKVATV PAEPSVPPTA KTVEASVASG GKWKEIQQIL LAMKEQTLLE IKRSIKKGSE VSVGEEPTGD IYDQASSERD RELGLLLNDR EREKLHSIDE ALLRIAEGEY GICEECDEDI PMGRLKVLPF TRHCVKCKSD LEKFQAQTRR IEEDRAYREI PVGDDDEG
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