| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3207 |
|---|
| Symbol | |
|---|
| ID | 6369144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3426837 |
|---|
| End bp | 3429593 |
|---|
| Gene Length | 2757 bp |
|---|
| Protein Length | 918 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642678624 |
|---|
| Product | TM1410 hypothetical-related protein |
|---|
| Protein accession | YP_001953433 |
|---|
| Protein GI | 189426256 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3868] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.107139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCC TGTCTGCAAT ACTTCTGCTG ATGCTGCTGG TGTATACCAC GCCGGCTGCG
ACAGCTGCTG TTGCAGCCCC CGGTCAATTC AGTGTGGCCT TTTTCTATGC TGATAATCCG
CCATTGGATG AACTGCAGGC CTTTGATCTG GTGGTGGTTG ATCCTGATGC TGCCGGGTAT
GCCCCGCAAT CTTATCGGAA TACTCATAGC GAGCTGTTTG CGTATGTTAG TGTCGGAGAA
GCGGATCCCC AACGAAAATT TTACAAACAG ATCAAACCGG ACTGGTTGCT TGGTGAAAAC
CGGGTCTGGA AAAGCAAGCT GGTTGACCTG GCCAATCCTG ACTGGCGGGC ATTTTTTCTG
GATCAGGTCG TTGAGCCGCT CTGGGCAGCC GGTTATCGCG GGTTTTTTCT GGACACGCTT
GACTCCTATC AACTGGTACA GGACAAACAA CGGCATCCTG CCCTTGAGGC CGGGCTGGTG
GAGATTATCC GCAGCATCAA AAAGCGGCAT CCCGAGGCCC GCTTGATCAT GAACCGCGGT
TTTGAGGTGC TGGAGCGTGT CAAGGATGCC GCCTTTGCAG TTGCTGCAGA ATCGCTTTTC
CGGAACTTTG ATCCCGCCAC CGGCAGCTAT GGTGAGGTGA ACGAAGATGA TCGCCAGTGG
CTGCTGGGAA AATTTGCCGA GGTGCGCAAG GCAGGACTTC CGGTGATCGT GATCGACTAC
GTTGCTCCGT CAGAGCGCGA TCTGGCCCGC ACGACCGCAG AGAAGATCAA GAAGGCCGGG
TTCATACCCT GGGTGACCGA CAAGGATCTG GCTTCGTTGG GGGTAGGAAC CGTAGAGGTG
CTGCCGCGCA AGATCCTGGG GCTGTATGAC GGCAGTGAAG GGGCAGATCC GATCTACACC
AACCTGCAGC GTTTTGTGGT CATGCCGCTG AACTATCTGG GCTATCAGGT TGAGCTGGTT
GATATGCGCC AGCCGTTACC GGCAGGTCAG CTTGCGGGGC GCTATGCCGG GGTGGTGGTC
TGGCCCAACT CGGACAGTTC CGGCAGCAAG AGCAACCTGT TGCAATGGCT TGTCCGCCAG
AAGGAGCACA AGCTGCCGCT GGTCTTTCTG GATCGTTTCG GTGTGCCGCC CCAGCAGTTT
GCCCAGGCGA TGGGGGGGAC GCTGCTTGCC GGACGTACCA CCGGTAAAGG GCTTAAGGTC
ATGCAGCAGG ATGCTCTGAT GGGATTTGAG ACGGCAGTCA TGCCGTCCGG GGCACCGCCG
GCGCTTCGTT TTCCCGGCAG TGAGGTGCTG CTGGCTGTGG GTGATGGCCA ACAGGTGGCC
AGTGAGGCGG TTGCGGTAAC CTCCTGGGGG GGATACGCCC TGGAACCCTA CGTGCTGAAT
GAGCTGATCA ATGAACGTGA ACGCTGGGTG ATCAACCCCT TTGAATTTTT CAGAAAGGCC
TTGCGCCTTG AAAACAGCCC CGTACCGGAT ACCACCACCG AAAACGGGGT GCGCCTGCTA
CTATCCCACA TTGATGCCGA CGGTTTTGAG AGCAGGGTTG AACGCCCCGG TGGACCGCTG
GCAGTAACCG AGCTGCGGGA GCGTATCCTG AAAAAATACC GGATACCGAC CACCTATTCC
GTGATCACCA GTACCTTGGG TGATCATGGC CTGAACCCGC AGCAGGCCCC GGCATTGCAG
GCTGAGGCCC GTGAGATTTT TGCGCTGCCC TGGGTTGAAG CGGGGAGCCA CACCTTTTCC
CATCCCTTTT ACTGGCAGAA TACCGACGTA GCCAAACAGG GCTACACAGC CCAGTATTTA
CCGATTCCCG GGTACCGTTT CCAGCTTGAA TCAGAGATTG CCGGTTCGGC GGCCTTTATC
AATCAGACCC TGTTGCCTCC CGGCAAAAAA ACCCGCCTGC TTCAGTGGTC TGGCGACTGT
GCGCCCGGGG GCGATGCGCT GGCTGCCACC TATCGTGCCG GGCTGGGCAA TATTAATGGC
GGCGACACGG TAATAACAGA ATCAAACAGG TCGCTTACGG CCGTTGCACC GTTGGGTGTG
GCAAAAAATG GCTGGTTTCA GGTTTTTGCC CCCAATCAGA ACGAAAACGT CTATACCAAT
CTCTGGACCG GTCCCTTTTA CGGCTATCGC CGGGTGATCG AGACCTTCCG GTTGACCGAT
GCCCCCCGCA GGCTGAAGCC GATCAACCTC TACTATCACA CCTATTCGGT TACCAAGGAG
GCCTCACGCC GTGCCCTGGA GGATGTCTAC GGCTGGGTGC TGGCCCGGAA ACCCCACGCG
ATTTTTACCT CCGACTACGT TAACAAGGTG CTGGATTTCA ACCGCACCGT GGTTGCCCGT
TCCGGCAGCG GCTGGTTGAT CCGTAACAAC GGCGATCTGC GACAGTTGCG TCTGCCGGTG
AGCGCCGGCT ACCCGGATCT GGAAGCCAGC CGCGGGGTGA TCGGTTTCTC GGATCACCAT
GATCAACGTT ACATCCATCT GGCGCCCGGC GGAGAGGCGT TCCTGCAGCT GACGGAGCAT
CGTCCCGGTC GGAGCTGGCT GGCAACTGCA ACTGCCGGCA TTGACCGCTT TGACTGGACG
GCCAGTGGTA TGCGCCTGAC CGTGACAGCT CAGACAGATG GCTACCTGAC CTTTGCTCAC
GCCACCGGTT GCCGTCTGGA CTCCAATGGT AGACCCGCGG CAGTACAACG GGATGCGGAA
CAACTTATCC TCCCGCTGAA AACAGGGATC TATGGCCTGG AACTGGTCTG CCAATAA
|
|---|
| Protein sequence | MQRLSAILLL MLLVYTTPAA TAAVAAPGQF SVAFFYADNP PLDELQAFDL VVVDPDAAGY
APQSYRNTHS ELFAYVSVGE ADPQRKFYKQ IKPDWLLGEN RVWKSKLVDL ANPDWRAFFL
DQVVEPLWAA GYRGFFLDTL DSYQLVQDKQ RHPALEAGLV EIIRSIKKRH PEARLIMNRG
FEVLERVKDA AFAVAAESLF RNFDPATGSY GEVNEDDRQW LLGKFAEVRK AGLPVIVIDY
VAPSERDLAR TTAEKIKKAG FIPWVTDKDL ASLGVGTVEV LPRKILGLYD GSEGADPIYT
NLQRFVVMPL NYLGYQVELV DMRQPLPAGQ LAGRYAGVVV WPNSDSSGSK SNLLQWLVRQ
KEHKLPLVFL DRFGVPPQQF AQAMGGTLLA GRTTGKGLKV MQQDALMGFE TAVMPSGAPP
ALRFPGSEVL LAVGDGQQVA SEAVAVTSWG GYALEPYVLN ELINERERWV INPFEFFRKA
LRLENSPVPD TTTENGVRLL LSHIDADGFE SRVERPGGPL AVTELRERIL KKYRIPTTYS
VITSTLGDHG LNPQQAPALQ AEAREIFALP WVEAGSHTFS HPFYWQNTDV AKQGYTAQYL
PIPGYRFQLE SEIAGSAAFI NQTLLPPGKK TRLLQWSGDC APGGDALAAT YRAGLGNING
GDTVITESNR SLTAVAPLGV AKNGWFQVFA PNQNENVYTN LWTGPFYGYR RVIETFRLTD
APRRLKPINL YYHTYSVTKE ASRRALEDVY GWVLARKPHA IFTSDYVNKV LDFNRTVVAR
SGSGWLIRNN GDLRQLRLPV SAGYPDLEAS RGVIGFSDHH DQRYIHLAPG GEAFLQLTEH
RPGRSWLATA TAGIDRFDWT ASGMRLTVTA QTDGYLTFAH ATGCRLDSNG RPAAVQRDAE
QLILPLKTGI YGLELVCQ
|
|---|
| |