| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3056 |
|---|
| Symbol | |
|---|
| ID | 6365956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3273330 |
|---|
| End bp | 3274373 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642678468 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001953282 |
|---|
| Protein GI | 189426105 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000688808 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATT GCATTCGACT CATATCAGCC ATCTGCCTGC TACTGCTTGC CCTTCCCCTG
TCGGCCCTTG CCTCCAAAAC CCACCAGGTC CGCACAAAAG AATCCCTTCA CAGCATCGCA
CGTAAATACC GCGTCTCGGT TGAAGAGCTC AAGGCTGCCA ACAATTTGAG CAGCATCCGC
ATTGCCAAGG GCACCACCCT GATCATCCCC TCCCGTGCCT CTGCTCAACC TGTCATTGAA
AACTGCAGCA GCTATACGGT TGCAAAAGGG GATACCCTGC CCAAAATCGC CAAAAAAACC
GGCAAGAAAA TGTCTGAACT ACGCCGGATT AACAATTTAA AGGCAAACAA GGTCAAGCCG
GGACAGGTTC TCGCCCTGGC AGACACCGCT GCAACCTGCG ACCTGACAGC TGCCCGACAG
ACGCGCGGCA AACGGCTGGA GCTGGTTAAC AGCGAGTTGT TGAATGAACA GGAGCTGAGT
GCCACCCTGT CGGAACTTTC CGACATTGAT GCCGACACCC CGGTTGACCT CGCTAAAAAC
CTTGAAGAAC GCTCCACCAC CTTCTCCACC CTGCAGAAAT CAGCCTACGG TTTCCTGGGC
GCACGTTACC GTTTTGGTGG CAACAGCCGT TATGCCCTTG ATTGCTCAAG TTTTACCCAG
CAGGTGTTCC GTGAGCAGAA GGTTTCATTG CCACGCACCG CACGTGAACA GTTCAGAGTG
GGCAACGAGG TTCCCCGCGG CGACCTGCGG CGTGGCGACC TGGTCTTCTT CCGCACCTAC
GCACCGTTTG CGTCACATGT CGGCATCTAC CTGGGCAACC GCAAAATGAT TCATGCCTCA
TCGGCCGAGC ACCGGGTGGT CATCTCCTCC ATGGACACCC CTTACTATCT GTCACGCTAT
CTGGGTGCCC GCCGGATTGA CCGGGTCAAC CCTGATACGA TCAACATCAA TGACCTGATG
CTTGGCATTG AAGAAGAGAA GGAAGGCGAT GTTCTGGCGA ACGACCATCT GGGACTTAAC
CTGCCCGACA CGCTTACCAA GTAA
|
|---|
| Protein sequence | MTHCIRLISA ICLLLLALPL SALASKTHQV RTKESLHSIA RKYRVSVEEL KAANNLSSIR
IAKGTTLIIP SRASAQPVIE NCSSYTVAKG DTLPKIAKKT GKKMSELRRI NNLKANKVKP
GQVLALADTA ATCDLTAARQ TRGKRLELVN SELLNEQELS ATLSELSDID ADTPVDLAKN
LEERSTTFST LQKSAYGFLG ARYRFGGNSR YALDCSSFTQ QVFREQKVSL PRTAREQFRV
GNEVPRGDLR RGDLVFFRTY APFASHVGIY LGNRKMIHAS SAEHRVVISS MDTPYYLSRY
LGARRIDRVN PDTININDLM LGIEEEKEGD VLANDHLGLN LPDTLTK
|
|---|
| |