| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2728 |
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| Symbol | |
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| ID | 6368953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2927626 |
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| End bp | 2928450 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642678143 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001952961 |
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| Protein GI | 189425784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGC GTCTGCAAAA AATCATATCC GCTGCCGGGA TCACCTCCCG CCGCGCTGCT
GAAGAGATGA TCCTGGCCGG ACGGGTTACG GTCAACGGTC AGGTGGTAAC CGAGCTGGGC
AGCAAGGCAG ACCCGGCCAA AGACCTGATC GCCCTGGACG GGCAGCCGGT CAAACCGGCT
GAAACGTTCT ATTACGTGCT GCTGCACAAG CCGGCCGGCT ATGTCACCTC GCTGAAAGAC
CCCCAGGGGA GACAGCTGGT AACCGAGCTG GTCAAGGATG TAGGCGAACG GCTCTTTCCG
GTGGGACGGC TGGACTACAA CTCTGAAGGG CTGCTGTTGC TGACCAATGA CGGCGCCTGG
GCCAACCGGC TGATGCATCC CCGTCACCAG GTGGACAAGG AATACCATGT GCGGGTACGG
GGTAAGATTG ATCCACAGCA GATCAAGAAG TTGGCTGATG GGGTGGAGCT GGAGGATGGC
CCCACCGGCG CCACGACGGT ACGCCTGCTG AAAAACGACC AGAGCAATGA CTGGCTCTCT
GTTACCATCC GTGAAGGCCG CAACCGTCAG GTACGGCGGA TGTGCGCGGC AGTGGGGCTG
TTTGTGGTAC GGCTGCGCCG TATCCGCTAC GGCAACCTGA CCCTGGGCGG CCTGCAGCCG
GGTGAATACC GTCTCTTGAG CAGGGAAGAG GCGCAGGCGC TGGATGCCCC GCCACCGGTC
AAACAACGGG AACAGCGAAT GGCAGCCCCT GTAAAATCAT CTACGACACC TCAGTCACAA
ACGCCGGGCA AGCGGCCACC TCGCAGAAAA ATCATCGGGC AGTAG
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| Protein sequence | MIERLQKIIS AAGITSRRAA EEMILAGRVT VNGQVVTELG SKADPAKDLI ALDGQPVKPA
ETFYYVLLHK PAGYVTSLKD PQGRQLVTEL VKDVGERLFP VGRLDYNSEG LLLLTNDGAW
ANRLMHPRHQ VDKEYHVRVR GKIDPQQIKK LADGVELEDG PTGATTVRLL KNDQSNDWLS
VTIREGRNRQ VRRMCAAVGL FVVRLRRIRY GNLTLGGLQP GEYRLLSREE AQALDAPPPV
KQREQRMAAP VKSSTTPQSQ TPGKRPPRRK IIGQ
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