Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2640 |
Symbol | |
ID | 6368526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 2829955 |
End bp | 2831319 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642678055 |
Product | sodium:neurotransmitter symporter |
Protein accession | YP_001952873 |
Protein GI | 189425696 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0280072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATC AACCACAGCC TCCACAGCAT TTCCGCGGGC GCTGGTCCAG CCGTCTGGGG TTCATCATGG CTGCAGCCGG CTCTGCTGTC GGCCTGGGCA ATATCTGGAA ATTTCCCTAC ATCACCGGTA TGCATGGTGG CGGTGCCTTT GTACTGTTCT ATCTCTTCTG CATTGTTACC ATTGGTGTGC CGCTGATGGT GGCCGAGATG GTTATCGGCA GGCATACCCG CAAAGATCCG GTGGGGGCCT TCAAACGACT GCGAGGCGGC GGCTGGACAC TGGTGGGCTG GATGGGGGTG GTGGCCGGGT TTGTCATTTT GTCGTACTAC TGTGTGGTGG CCGGATGGGC CGTGGACTAT CTCTGGCTGG CGTTGAAGGG GACTTTTTCC TTGCAGTATG CCGCTCAGGT TCCCCAGCTG TTTGGCGACC TGCTGGCAAG TGATTGCAGT CAACTGTTCT GGCAGGCCAT CGTTATGGTT GCCACGGTGC TGATCGTGAT CGGTGGCGTC AAGAGCGGCC TGGAAAGAGC CAACAAGATC ATGATGCCGA TACTGTTCCT GATCCTGGTG GCGCTGGCAG GCTATGGCTT CTTTTCTTCA GGTGGTGTCA AGGCGTTTCA GTTTCTGTTT GCACCGGATT GGAGCAAGCT GGATCCGCCT GCCATGCTGG AGGCATTGGG GCATGCCTTT TTCAGTCTCA GCCTGGGGAT GGGGGCGATG TTGACCTATG GCAGCTATGC TGATGAGGAG ATAAGCATCC CCAGGGTTGC CATTACCGTC TCGATTATGG ATACGCTGGT GGCGCTGCTG GCCGGTCTGG CCATCTTTCC GATTGTATTC AGCTATGGTA TGGCCCCTGC TGCCGGTCCC GGGCTGGTTT TCAAGACGCT GCCGATTCTG TTCAGCCGGA TGCCGGGTGG CACCCTGATC GCCATTCTGT TTTTCCTGCT GCTGGTGTTT GCAGCCCTTA CCTCGGCCAT ATCCCTGCTG GAAGTGGTGG TGGCTTACTA CTGTGATGAG CTTAAATGGG ATCGCACCAA GGCAACCCTG ATTGCAGGGG TGTTAATTTT TGTGCTGGGT GTTCCTGCAG CCCTCTCCAA TAACCTTCTG AAAGACTGGC ATCTGCTCGG GGCACGCAAC TTTCTGGATT CGGTTGATTT TCTGTCTACC AACTATCTTC TGCCGTTGGG AGGTCTGTTG ATCACCCTGT TTGCCGGCTG GGTCCTGACC CCCAAGGTCG GCAGGGAAGA GCTGTTAAAG GGTGGGGGAA GCCAGGGGGT CTACCGGGTC TGGTTCTTTC TGATCCGCTA CATTTCGCCG GTATTGGTGG CGCTGGTACT GCTGAACAAG ATCGGTCTGT TTTGA
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Protein sequence | MSHQPQPPQH FRGRWSSRLG FIMAAAGSAV GLGNIWKFPY ITGMHGGGAF VLFYLFCIVT IGVPLMVAEM VIGRHTRKDP VGAFKRLRGG GWTLVGWMGV VAGFVILSYY CVVAGWAVDY LWLALKGTFS LQYAAQVPQL FGDLLASDCS QLFWQAIVMV ATVLIVIGGV KSGLERANKI MMPILFLILV ALAGYGFFSS GGVKAFQFLF APDWSKLDPP AMLEALGHAF FSLSLGMGAM LTYGSYADEE ISIPRVAITV SIMDTLVALL AGLAIFPIVF SYGMAPAAGP GLVFKTLPIL FSRMPGGTLI AILFFLLLVF AALTSAISLL EVVVAYYCDE LKWDRTKATL IAGVLIFVLG VPAALSNNLL KDWHLLGARN FLDSVDFLST NYLLPLGGLL ITLFAGWVLT PKVGREELLK GGGSQGVYRV WFFLIRYISP VLVALVLLNK IGLF
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