Gene Glov_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_2474 
Symbol 
ID6368411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp2643102 
End bp2644025 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID642677890 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_001952708 
Protein GI189425531 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTAC CTATCCTGCC ACCATTAAAG CCGCTGCCGA TCAAAGACCG TATTTCTGTG 
GTCTATGTGG AGCGGGGCAA CCTTGATGTT ATCGACGGCG CTTTTGTGGT GGTGGATGCA
ACCGGCGTCC GCACCCATAT TCCCATCGGC ATGGTTGCCT GTTTGATGCT TGAACCGGGT
GCGCGGGTTT CCCATGCTGC GGTGGTGCTG GCAGCGCGGG TAGGCTGCCT GCTGGTCTGG
ATCGGTGAGG CCGGGGTACG GCTGTACGCT GCCGGTCAGC CGGGCGGGGC GCGGTCGGAT
CGGCTGTTGT ATCAGGCCAA GCTGGCCTTG GATGATTCAG CCCGTTTGAA GGTGGTGCGC
AAGATGTACG CTCTGCGGTT TAAGGAAGAA CCGCCGGAGC GGCGCAGTGT GGAACAGTTG
CGCGGCATTG AAGGGGTACG GGTCCGCAAG ATGTATGAAC TGCTGGCCCG GCAGTACGGG
GTGGAGTGGA AGCGCCGAAA CTATGATCAT ACCGAATGGG AGAGCGGCGA TCTGCCCAAT
CGCTGTCTGT CGTCCGCCAC GGCCTGTATT TATGGTATCT GCGAGGCAGC GATACTGGCA
GCAGGCTATG CACCGGCAGT AGGCTTTATC CATACCGGTA AACCGCAATC GTTTGTGTAT
GATATTGCTG ATATCTTCAA GTTTGAGACG GTTGTGCCGG TGGCCTTCCG TATCGCTGCC
AAAAAGCCCC GTGATCCTGA GCGTGAAGTA CGTCTGGCCT GTCGTGATGC CTTCCGGCAG
AGCAAGCTGC TGGACAAGAT TATCCCCACC ATTGAAGAGG TATTGGCAGC AGGAGAGCTG
GAGCGGCCAA AGGCCCACGA AGAGGCGGTG GAGATCGCTA TTCCCAACAA AGATGGGCTG
GGTGATCCGG GGTTAAGAGG CTAA
 
Protein sequence
MTLPILPPLK PLPIKDRISV VYVERGNLDV IDGAFVVVDA TGVRTHIPIG MVACLMLEPG 
ARVSHAAVVL AARVGCLLVW IGEAGVRLYA AGQPGGARSD RLLYQAKLAL DDSARLKVVR
KMYALRFKEE PPERRSVEQL RGIEGVRVRK MYELLARQYG VEWKRRNYDH TEWESGDLPN
RCLSSATACI YGICEAAILA AGYAPAVGFI HTGKPQSFVY DIADIFKFET VVPVAFRIAA
KKPRDPEREV RLACRDAFRQ SKLLDKIIPT IEEVLAAGEL ERPKAHEEAV EIAIPNKDGL
GDPGLRG