| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2374 |
|---|
| Symbol | |
|---|
| ID | 6366320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2548279 |
|---|
| End bp | 2551383 |
|---|
| Gene Length | 3105 bp |
|---|
| Protein Length | 1034 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642677792 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001952610 |
|---|
| Protein GI | 189425433 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTTT CCGAACTCTT TATCCGCAGG CCGATTGCCA CCAGCCTGGT CATGCTGGCC
GTGCTGGTGT TCGGTCTGCT GGCCTATCGC GGCCTGCCGG TTAATGACCT GCCCACGGTT
GATTTTCCCA CGATACAGGT AACCTCCAAC CTGCCCGGCG CCAGCCCCGA AACCATGGCC
TCTGCGGTGG CCACCCCGCT TGAACGGGAG TTTTCCACCA TTGCCGGTCT GGACTCCATG
ACCTCTACCA ATGGGCAGGG GATCTCTATC ATCACGCTGA AATTTACCCT GAAACGCAAT
ATCGATGCAG CTGCGCTGGA TGTACAGGCC GCCATTGCGA AGGCGATGCG CAAGCTGCCG
GCCGACATGA CAACCCCGCC TTCCTACCGC AAGGTCAACC CCGCTGATTC GCCGGTGCTC
TACCTTGCGC TCAACTCGGA AAGCATGCCG TTGCATCAGG TGAACGAGTA CGCCGATACC
ATGCTGGCAC AGCGGATCTC CATGGTAAGC GGTGTGGCCC AGGTACTGGT CTATGGCTCG
CAGAAATACG CTGCCCGGGT GCAGGTCGAT CCGCGTCAGC TGGCGGCCCG CGGGATCGGG
ATTGATGAGG TTGCCTCAGC CCTGGCCCGT GCAAACTCGA ACCTTCCCAC CGGTGTGCTG
CAGGGGAAGC AGCAGGCCCT GACGATCCAA ACCAATGCGC CGCTCCTGAA GGCAGAGGCC
TTCAGGCCGA CCATCATTGC CTGGAAGAAC GGTTCGCCGG TGCGGGTACA GGATGTCGGT
ACCACGCTGG ACAGCGTGGA GAACGATAAG GTGGCGGCCT GGTACAATCG CAGGGAGTTT
GCGACCCGGG CCATTGTGCT GGCGGTCCAG CGTCAGCCGG GCGCCAATAC CATTGAGATG
GTGGATGCCA TCAAGCAACT CCTGCCGGAA TTCCAGAACC AGCTCCCTGC CGCCCTTCAG
ATGAATGTCC TCTACGACCG GACGGTTTCG ATCCGGGAGT CGGTTGATGA AGTCAAGTTT
ACGCTGGTCT TGACCATCTG CCTGGTGATC ATGGTGATCT TTCTCTTTCT GCGCAACCTG
CCGGCCACCC TGATCCCCAG CCTGGCAGTG CCCCTCTCGA TTGTCGGGAC CTTTGCCGTC
ATGAGCGGCC TGGGTATTTC CATCAACAAT ATCAGCCTGC TGGCGCTGAC CCTGTCGGTT
GGTTTTGTCG TGGATGACGC CATTGTGATG CTGGAAAATA TCGTGCGCCA CATTGAGGAG
GGGATGAAGC CGATGGAGGC GGCCCTGCGC GGATCGCGGG AAATCGGGTT TACGATTGTT
TCCATGACCA TCTCACTGGT TGCGGTGTTT ATTCCGGTGC TGTTTATGGG GGGGATGCTG
GGGCGGCTCT TGAACGAGTT TGCTGTTACC ATCTCTGCGG CGATCCTGAT TTCAGGTTTT
GTCTCCCTGA CTCTGACGCC GATGCTCTGC AGCAGGTTTC TGAAGCCACA CGACGTCTCC
CGGCAGCATG GCCGCCTCTA TCAGCTGCTG GAACGTTTCT TTGATCTGTT GCGTGACGGG
TATGCTACGT CGCTGAAGTG GGTGCTGAGG CATCTCAGGT CTGCACTGCT CTTTACCATT
GCAACCGCAC TGGTCACCAT CTGGCTTTTT GCGCGCATGC CTGCCGGACT CTTTTCCAGT
GAGGATACCG GCGGTATCTA CGGCATTACG GAAGGCGCCC AGGGGATATC TTTTGAAGAG
ATGATGCGTA ATCAGCAGCT TGCTGCCGAC ATTGTGCGTC AGAATCCCAA TGTTGAGGCG
TTCATGTCCT CTGCCGGTGC TTCCGGTTCA CGGGTCGGCT CCAACAGCGG CTTCATGTTT
ATCCGGCTGA AGCCCCTCAG CCAGCGTAAA GACAGCGCCG ACACGGTTAT TCAGCAGCTC
AGGCCGAAGC TGGCCCAGCT GCCCGGTATT CAGGTTTTTC TGCAGAATCC GCCGCCCATC
CGGCTGGAGG CGACACTTTC AAAGGCACAG TACCAGTTCG CCCTGATGTC GCCCGACACC
ACCCAGCTGT ATCAGGCTGC CGCCCAGTTT GAGTCGCGCC TCAAGGGGCT GCCGATTCTG
CAGGATGTTA CTTCGGACCT TCAGATCAGG AATCCCGAGC TGAGGCTTGC CATAGACCGG
GATCATGCTG CAGCTCTGAA TGTCTCCCCG CAGCAGTTGG AAGATGCCTT GTACTACGCC
TATGGTTCCC GCCAGGTATC CACCATCTTT GCCCCGAGCA ACCAGTATCA GGTCATACTG
GAGGTGGAGC CGCAGTACCA GAAGGACCAG GCCGCCCTTG GCCTGCTCCA TGTCCGTTCT
ACCATCGGCC AATTGGTGCC GCTCTCTACC TTGTTGACCG CACAGCGCTC AGTCGGGCCA
CTGACCGTCA ACCACTTGGG GCAGTCCGCT GCAGTGACCG TCTCCTTCAA TATCCGCCCC
GGCGTGCCGC TTGGTGAGGC AACTGCTGCT GTGGAAAAAG AGGCCAAAGC CCTGCCCACC
GGGATCACCA CCGCCTTTCA GGGAACAGCC CAGGCCTTCA AACAATCATT CTCCGGGCTC
AGCTGGCTGC TTATCGCCGC TGTGGCAGTG ATCTATATCG TGCTGGGGGT GCTGTACGAA
AGTTACATCC ATCCGGTGAC GATCCTTTCC GGTCTGCCGT CGGCAGGGCT CGGGGCGTTG
CTGACCCTGT TGCTGTTCGG CCATGAGTTG AACCTGTACG CCTTTGTGGG GATTATCCTG
CTGGTGGGGA TCGTCAAGAA AAACGCCATC ATGATGATCG ACTTTGCCCT GGATGCCCAG
CGTACGGAAG GGATCACCCC TGAGCGGGCC ATCTACCAGG GCTGCCTGAT CCGTTTCCGC
CCCATTATGA TGACCACGAT GGCCGCCCTG ACCGGGGCGC TTCCGATCGC ACTGGGGATC
GGTGCCGGTG CCGATGCACG CCGTCCTCTG GGGCTGGCGG TGGTTGGCGG TTTGCTGGTA
TCACAAATTT TAACACTGTA CATTACACCA GTAGTCTATA TATATCTTGA CCGCCTGCAA
CAGCACATCA GGCGGACGCC GCGGCAGGAG AAGGCAGATG ACTGA
|
|---|
| Protein sequence | MNVSELFIRR PIATSLVMLA VLVFGLLAYR GLPVNDLPTV DFPTIQVTSN LPGASPETMA
SAVATPLERE FSTIAGLDSM TSTNGQGISI ITLKFTLKRN IDAAALDVQA AIAKAMRKLP
ADMTTPPSYR KVNPADSPVL YLALNSESMP LHQVNEYADT MLAQRISMVS GVAQVLVYGS
QKYAARVQVD PRQLAARGIG IDEVASALAR ANSNLPTGVL QGKQQALTIQ TNAPLLKAEA
FRPTIIAWKN GSPVRVQDVG TTLDSVENDK VAAWYNRREF ATRAIVLAVQ RQPGANTIEM
VDAIKQLLPE FQNQLPAALQ MNVLYDRTVS IRESVDEVKF TLVLTICLVI MVIFLFLRNL
PATLIPSLAV PLSIVGTFAV MSGLGISINN ISLLALTLSV GFVVDDAIVM LENIVRHIEE
GMKPMEAALR GSREIGFTIV SMTISLVAVF IPVLFMGGML GRLLNEFAVT ISAAILISGF
VSLTLTPMLC SRFLKPHDVS RQHGRLYQLL ERFFDLLRDG YATSLKWVLR HLRSALLFTI
ATALVTIWLF ARMPAGLFSS EDTGGIYGIT EGAQGISFEE MMRNQQLAAD IVRQNPNVEA
FMSSAGASGS RVGSNSGFMF IRLKPLSQRK DSADTVIQQL RPKLAQLPGI QVFLQNPPPI
RLEATLSKAQ YQFALMSPDT TQLYQAAAQF ESRLKGLPIL QDVTSDLQIR NPELRLAIDR
DHAAALNVSP QQLEDALYYA YGSRQVSTIF APSNQYQVIL EVEPQYQKDQ AALGLLHVRS
TIGQLVPLST LLTAQRSVGP LTVNHLGQSA AVTVSFNIRP GVPLGEATAA VEKEAKALPT
GITTAFQGTA QAFKQSFSGL SWLLIAAVAV IYIVLGVLYE SYIHPVTILS GLPSAGLGAL
LTLLLFGHEL NLYAFVGIIL LVGIVKKNAI MMIDFALDAQ RTEGITPERA IYQGCLIRFR
PIMMTTMAAL TGALPIALGI GAGADARRPL GLAVVGGLLV SQILTLYITP VVYIYLDRLQ
QHIRRTPRQE KADD
|
|---|
| |