Gene Glov_2235 details

Gene Information

• Locus tag: Glov_2235
• ID: 6368178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 2385628
• End bp: 2387496
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642677650
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_001952471
• Protein GI: 189425294
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.77755
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACTTG AAACCATACA GAACCCTGCT GACCTGAAAA AGCTGACACC GGAACAACTC 
CCGGATTTGG CTGAAGAAAT CCGCTCTTTT CTGCTCTCAA CCGTATCGGA AACCGGTGGA 
CACCTGGGGT CAAACCTTGG TGCGGTCGAG CTGTCCCTGG CCCTGCATTA CTGTTTTAGC 
ACCCCGCAGG ACAAGATTGT CTGGGATGTT GGTCACCAGG CATACACCCA CAAGCTGTTG 
ACCGGACGCC GGGATCGCTT TGCCACCCAA CGCCAGTACA AAGGGATATC CGGCTTCCCC 
AAACGGTGCG AATCAGAACA TGATGCCTTT GGCGTGGGGC ACGCATCCAC CTCCATCTCC 
GCTGCCCTGG GCATGGCGGT TGCCGACAAC CTGGATCAGA AGAAGAATAA TGTGATTGCC 
GTGATCGGCG ACGGTTCCCT GACCGGCGGC ATCGCCTTTG AAGGCCTGAA CCAGGCCGGC 
CACCTCAAGA AAAATCTGAT TGTGGTGCTG AACGACAACG AGATGTCCAT CTCCAAGAAC 
GTCGGTGCCT TTTCCGCCTT TGTCTCCCGT AAGATGACCA CCCGTCATTT CCGTGAATTG 
AAAAAGGAGA TGAAGGAACT GCTGACCAGC ATCCCGGCCT TTGGCAAGGA TATCCTTAAG 
TTTGCCCGTC GCGCTGAAAA CTCTCTCAAA GGTTTTTTGA CCCCTGGCGC GCTGTTTGAG 
GCCCTGGGGT TTGACTACAT CGGTCCGATT GACGGCCATG ACCTGCCCGG CCTGATTGAA 
GTCTTCAATA ATGCCCGTGA GTTTGACGGC CCGCTGCTGC TGCATGTCAT GACCACCAAG 
GGCAAGGGCT ACCGTCCGGC TGAAGAGACA CCGGACAAAT TCCACGGTGT AGGTGCCTTT 
GATCTCTCCA CCGGCAAAGC ACCGGCCAAG TCATCCACGA TTTCCTACAC TGAAGTCTTT 
GGACGCACCC TGGTTGATCT GGCCAAGGAA GATCCAAAAG TTGTCGCCAT CACCGCTGCC 
ATGCCGGACG GTACCGGTCT GAACTTCTTT AGCGATGCCC TGCCGGACCG TTTCTTTGAT 
GTGGGTATTG CAGAGCAGCA CGGCATCTGT TTTGCCGCTG GACTGGCTGC TGACGGCTTC 
AAGCCGGTGG CAGCGATCTA CTCATCCTTC ATGCAGCGGG CCTATGACCA GGTCTTCCAT 
GATGTCTGCC TGCAGAACCT GCCGGTGGTA ATCGCCATGG ATCGCGCTGG ACTGGTGGGT 
GATGATGGCC CCACCCACCA CGGCGTGTTT GACCTCTCAT TCATGCGCCA CCTGCCGGGC 
CTTACTTTTA TGGCCCCCAA GGATGAAAAT GAACTACGCC ACATGCTCAA AACCGCACTG 
GAACTGAAGG CCCCGGTGGC CCTGCGCTAC CCCCGTGGAG CAGGCTATGG CGTGCCCCTG 
GATAAAAAAA TGGAATGCCT GCCTATCGGC AAAGGTGAGC TGCTGCGGGA AGGCACTGAC 
CTGACCATTG TTGCCATTGG TTCAACAGTC ATGCCTGCGG TCAAGGCAGC TGAACAGCTT 
GCAGAGCAGG GAATCAGCGC CGGTGTCGTA AATGCCCGTT TCATCAAGCC GCTGGATGCC 
GATCTGATCC TTGGTCAGGC CAGGGCAACC GGCAGGATTG TAACGGTTGA AGAAAACGTC 
CTGCAGGGCG GCTTTGGCAG TGCCGTGCTT GAACTGCTGC AGGATAACGC TATGTCACAG 
GTCAAGGTCA AACGGCTTGG CATACCGGAT CAGTACATTG AACAGGGAAC CCAGGCACAA 
CTCCGTAAGG ATGTGGGGAT TGATGCTGAT GGTATAGCAG CTGCAGTACA GGCGTTTCTG 
AAGAATTGA 

 

Protein sequence

MLLETIQNPA DLKKLTPEQL PDLAEEIRSF LLSTVSETGG HLGSNLGAVE LSLALHYCFS 
TPQDKIVWDV GHQAYTHKLL TGRRDRFATQ RQYKGISGFP KRCESEHDAF GVGHASTSIS 
AALGMAVADN LDQKKNNVIA VIGDGSLTGG IAFEGLNQAG HLKKNLIVVL NDNEMSISKN 
VGAFSAFVSR KMTTRHFREL KKEMKELLTS IPAFGKDILK FARRAENSLK GFLTPGALFE 
ALGFDYIGPI DGHDLPGLIE VFNNAREFDG PLLLHVMTTK GKGYRPAEET PDKFHGVGAF 
DLSTGKAPAK SSTISYTEVF GRTLVDLAKE DPKVVAITAA MPDGTGLNFF SDALPDRFFD 
VGIAEQHGIC FAAGLAADGF KPVAAIYSSF MQRAYDQVFH DVCLQNLPVV IAMDRAGLVG 
DDGPTHHGVF DLSFMRHLPG LTFMAPKDEN ELRHMLKTAL ELKAPVALRY PRGAGYGVPL 
DKKMECLPIG KGELLREGTD LTIVAIGSTV MPAVKAAEQL AEQGISAGVV NARFIKPLDA 
DLILGQARAT GRIVTVEENV LQGGFGSAVL ELLQDNAMSQ VKVKRLGIPD QYIEQGTQAQ 
LRKDVGIDAD GIAAAVQAFL KN