| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2234 |
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| Symbol | |
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| ID | 6367477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2384628 |
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| End bp | 2385617 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642677649 |
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| Product | hopanoid-associated sugar epimerase |
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| Protein accession | YP_001952470 |
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| Protein GI | 189425293 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00968457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCTT TTGTCACCGG CGCCACCGGC TTTATCGGCG CCAGTATAGT GCGGGAACTG
TTGAAGGATG GCCACAGAGT TGCGGCACTG GTCAGGAACG GATCTGATAC CGCCAACCTT
CAGGGGCTTG ACGTCACCAT CCTGCGGGGT GATCTGCATG ACCAACAGCA GCTTGAGCAG
GGCATGGCCG GCTGCGATTG GGCCTTTCAT GCTGCTGCCG ATTACCGGCT CTGGTGTCCT
GAACCACAAG CCATGTACCA TGCCAATGTG GATGGCACCC GTACCCTGTT GGCTGCAGCA
CTTGCTAGCG GTGTGACACG GGTGGTGTAC ACCAGCAGTG TCGGCACCCT GGGCAACCCC
GGCAATGGCA CGCCAGGCAC GGAAGAGACA CCGGTCAGCC TGACCGACAT GGTGGGAGAC
TATAAAAAGA GTAAGTTTCT GGCAGAGCGG GAAGCGGAAA AATTCGTTGA CAAGGGTCTT
GGCCTGATTA TAGTCAACCC TTCCACCCCG GTGGGGCCGT TTGACATCAA ACCAACCCCT
ACCGGCAAGA TCATTGTGGA TTTTTTGAAC CGCAAGATGC CGGCCTACCT TGATACCGGC
CTGAATCTGA TCGCCGTGGA AGACTGCGCC CGAGGCCATA TCCTGGCAGC GGAAAAAGGA
CGGATCGGCC AGAAATACAT CCTTGGCAAC CGGGATCTCA CCCTGCGGGA TATCTTCGGC
ATGCTTGAGC AGCTGACCGG CCTTGCAGCC CCCAGGGTGC GTCTGCCCTA CACGCCGATC
CTGCTGGCTG CCTATGTAAA CGAGGCAGTT TCACGGCTGA CCGGCAGAGA ACCGCTGATT
CCGTTGGCCG GTGTCCAGAT GGCAAAGAAA TTCATGTTTT TCGATGCATC CAAGGCAGTG
CATGAACTGG GGCTTCCCCA GACTCCGGTA GAAGAGGCAC TTAAGCGGGC TGTTGACTGG
TTCCGTTTCA ATGGCTATGC CTCTGCATAA
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| Protein sequence | MKAFVTGATG FIGASIVREL LKDGHRVAAL VRNGSDTANL QGLDVTILRG DLHDQQQLEQ
GMAGCDWAFH AAADYRLWCP EPQAMYHANV DGTRTLLAAA LASGVTRVVY TSSVGTLGNP
GNGTPGTEET PVSLTDMVGD YKKSKFLAER EAEKFVDKGL GLIIVNPSTP VGPFDIKPTP
TGKIIVDFLN RKMPAYLDTG LNLIAVEDCA RGHILAAEKG RIGQKYILGN RDLTLRDIFG
MLEQLTGLAA PRVRLPYTPI LLAAYVNEAV SRLTGREPLI PLAGVQMAKK FMFFDASKAV
HELGLPQTPV EEALKRAVDW FRFNGYASA
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