| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2182 |
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| Symbol | |
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| ID | 6367046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2327708 |
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| End bp | 2329585 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642677596 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001952418 |
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| Protein GI | 189425241 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0455646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAC TGAATCAGAT CAATGCACCT GCAGACCTGA AACAACTGCC TCAGACGGAT
CTGCCAAAGC TGGCAGCAGA GATCCGCCAG CTGATTATTG AGACCTGCGC CAAAAATGGT
GGCCATATTG CCCCTTCGCT GGGGGTGGTT GAGCTGACCA TTGCCCTGCA CAAGGTCTTT
AATTCACCGG AAGACAAGCT GATCTGGGAT GTGGGGCACC AGGCCTACGC CCACAAGATT
ATCTGCGGAC GTCGTGACAG TTTTAACTCC CTGCGCACTC TTGATGGTAT CAGCGGTTTT
CCGAAGCGTT GTGAGTCAGA GCATGATGTC TGGGAAGTGG GGCACTCCTC CACCTCGCTT
TCGGCAGCCA CTGGTTATGC TGTGGCGCGG GACCTGGCCG GCAGGACCAA CAAGGTGGTG
GCGGTGATCG GTGATGGTTC CATGACCGGC GGCATTGCCT TTGAAGGTCT GAACCATGCC
GGGCATCTGA ACCGCGATCT GGTGGTGGTG CTGAACGACA ATGAAATGTC GATTGCCGAG
AACGTGGGAG CGGTGTCAGG CTTTCTTTCC CGCACCTCCA GCAGCGAGTT CATCCACAAA
TTCAAACGTG AAACCGAGCA ACTTATCAAG CATGCAAAAA GTGATATGGG GCAGGGGGCT
ATCAGGCTTG CCCGCAAAAT TGAAAATTCC TTTAAAGGGC TGTTTACACC GGCCATGTTG
TTTCAGGCAT TTGGCTTCGA ATATATCGGC CCGATTGACG GTCATGATCT GCCATTGCTG
CAGGAAACCA TGGAACGGGT CAAAAAACTG GATACTGCTG TTTTAATCCA TGTCCTGACC
ACCAAGGGCA AGGGTTACAA ACCGGCAGAG CAGAACCCAT CCCTGTTCCA CGGGGTTGGA
CCGTTTGAGC TTGAAACCGG CAAGGTCCTG AAAGGCAAGG GGGGGGCTGC CTCCTACACC
GCCATCTTCG GCAACACCCT GGCACGGCTG GCAGAGGAGG ATGAGCGGGT CGTGGCCATT
ACGGCTGCCA TGCCGGACGG CACCGGACTG ACCAATTTTG CAAAACAGCA TCCCGAGCGG
TTCTTTGATG TGGGCATTGC CGAGCAGCAT GGTGCCACCT TTGCTGCCGG TCTGGCCTGC
GAAGGCAAGA AACCGGTCTT TGCGGTCTAC TCCACCTTTC TGCAGCGGGC CTATGATCAG
GTGCTGCACG ATGTCTGTAT CCAGAATCTA CCGGTGGTGT TTGCCCTTGA CCGGGGCGGG
GTAGTGGGTA ACGACGGTCC TACCCATCAC GGCGTCTTTG ATCTCTCCTA TCTGCGTCAT
ATCCCCAATA TGACCCTGAT GGCACCCAGG GATGAAAACG AGCTGCAGCA TATGCTTAAG
ACAGCGATCG ACTTTAACGG CCCCATTGCA CTGCGTTACC CTCGTGGTAA CGGCTACGGT
GTGCCCCTTG ATCAGGACCT GAAGCCGTTA ACTATCGGCA AGGCTGAACT GCTGCGTGAA
GGTGCTGATG GTGTCCTGGT TGCCCTGGGC TCAATGGTGT ATCCTGCCCT GGATGCTGCT
GCAGAGCTTG CCACAGAAGG GTTGGACCTG AGCGTGGTAA ATGCCCGTTT TGTCAAACCG
CTGGATGCAG AGCTGCTGCT TCAGCTGGTC AAGCGTTTTG GCAGGCTGGT TACCCTTGAA
GAAAATGCGC TGCAGGGCGG CTTTGGTACC GCTGTGCTGG AGCTGCTGGA AGAGCAGGGG
CTGCAGGCGC AGGTTTTGCG GATCGGCTAT CCTGATCAGT ATATTGAGCA GGGTGAGCAA
CATGAACTGC GGGCCATGCA TGGCCTGGAC AAGGAAGGCA TTGCCAAATC CGCACGGATG
TTTTTCAAGT CGCCCTGA
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| Protein sequence | MSLLNQINAP ADLKQLPQTD LPKLAAEIRQ LIIETCAKNG GHIAPSLGVV ELTIALHKVF
NSPEDKLIWD VGHQAYAHKI ICGRRDSFNS LRTLDGISGF PKRCESEHDV WEVGHSSTSL
SAATGYAVAR DLAGRTNKVV AVIGDGSMTG GIAFEGLNHA GHLNRDLVVV LNDNEMSIAE
NVGAVSGFLS RTSSSEFIHK FKRETEQLIK HAKSDMGQGA IRLARKIENS FKGLFTPAML
FQAFGFEYIG PIDGHDLPLL QETMERVKKL DTAVLIHVLT TKGKGYKPAE QNPSLFHGVG
PFELETGKVL KGKGGAASYT AIFGNTLARL AEEDERVVAI TAAMPDGTGL TNFAKQHPER
FFDVGIAEQH GATFAAGLAC EGKKPVFAVY STFLQRAYDQ VLHDVCIQNL PVVFALDRGG
VVGNDGPTHH GVFDLSYLRH IPNMTLMAPR DENELQHMLK TAIDFNGPIA LRYPRGNGYG
VPLDQDLKPL TIGKAELLRE GADGVLVALG SMVYPALDAA AELATEGLDL SVVNARFVKP
LDAELLLQLV KRFGRLVTLE ENALQGGFGT AVLELLEEQG LQAQVLRIGY PDQYIEQGEQ
HELRAMHGLD KEGIAKSARM FFKSP
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