Gene Glov_2168 details

Gene Information

• Locus tag: Glov_2168
• ID: 6367262
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: -
• Start bp: 2316100
• End bp: 2316648
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642677581
• Product: lipopolysaccharide transport periplasmic protein LptA
• Protein accession: YP_001952404
• Protein GI: 189425227
• COG category: [S] Function unknown
• COG ID: [COG1934] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03002] lipopolysaccharide transport periplasmic protein LptA

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAGA TTGAGCGGAT ACTGGTGCTT GTTTCTGTCT GGCTCCTGGG CGTGCTGCCT 
GCCGTGGCTG CTTCTCAGCC GGCGTCAGGG GGGGCGGCTG CGCGTGACCG TTCTTCTCGG 
CCCATCACGA TCAAGGCCGA TGAACTGAAG GCCGACAATA AAGGCAAGAT CGCAACATTT 
ACCGGACGGG TGGTGGCACG CCAGGAGGAT GTTACCATCT ATTCCGACAA GCTGGTTATC 
TACTACGGCG ATAAGCAGGA CCAGGTCGAC AAGATAGAGG CGATCGGCTC AGTGCGGATT 
CTGCAGACCA ACCGGATCGG TACCGGTGGA CATGCCCTGT ATGAGAGCAG GGAGGGGAAG 
ATCACCCTTT CCGGTAATCC CAAGGTGACG CAGGACAAGG ATTCCATCAC CGGCAAGGTG 
ATTGTCTACT ATCTGGATGA TGATCGCAGT GTGGTTATCG GCGGCGAAAA CGCCAGGGTT 
GAAGCGGTGA TTCACCCCAC TAAATCAGGT GCCACCCTGA AAAAGCATGA CGCAAAAAAA 
CAGCCATAG 

 

Protein sequence

MGKIERILVL VSVWLLGVLP AVAASQPASG GAAARDRSSR PITIKADELK ADNKGKIATF 
TGRVVARQED VTIYSDKLVI YYGDKQDQVD KIEAIGSVRI LQTNRIGTGG HALYESREGK 
ITLSGNPKVT QDKDSITGKV IVYYLDDDRS VVIGGENARV EAVIHPTKSG ATLKKHDAKK 
QP