| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2009 |
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| Symbol | secD |
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| ID | 6366713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2138000 |
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| End bp | 2139592 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642677421 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001952245 |
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| Protein GI | 189425068 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAGG GAACCGGATG GCGCATCGCC CTGATCGCAG CCTTTATTGT CCTGTCCTGC
ATCTACCTGG TGCCAACCTT GAACCCCAAA CTGCCGGACT GGTGGAAAGG GATGTTGCCC
AAAGATAAGA TCCACCTGGG GCTCGACCTG CAGGGGGGAA CTCACCTGGT GCTTGAGGTG
GAGACTGCAA AGGCGGTTGA AGGGACCCTG GATCTGGTTG CAACCGACCT TGAGGATACC
CTGAACAGCA AAAACCTGCG TTTCAAACGG ATCAGCCGTA CTGGCAGCGA TAAAGTAGCG
ATTGTCATGT ACGAAAAAGA TACCGCTGCT GCCGTTCAGA AGCTGGTCAA GGAAAAGTAT
CGCGATTATG AGATGATCCC CACAGTGGAA GAGGGGGGGA TGGTCGGGAT AGCTCTCCGG
ATGAAGGAAC AGGATATCCA GGATCGCAAG GACAAGGCGG TTGCCCAGGC TCTTGAGACT
ATTCGTAACC GGATTGACCA GTTCGGTGTA TCCGAGCCGG TAATTGCCCG TCAGGGAATC
AACCAGATTG TGGTGCAGCT GCCCGGCATT AAAGATCCCC AACGTGCTAT CGCACTGATT
GGACGTACTG CCCGCCTTGA GTTCAAAATG GTCAAAGAGG GGGTTTCACC CACCGGCGGA
GCCGTACCGG AGGACAGTGA AGTGCTGTTT GAAAAACACA CAGATCCTGT GACCGGTGCA
ACTACCGAGA CTCCTCTGGT AGTGTACAAA AAGGCCCTGA TCACCGGGGA TCTGCTGACC
GATGCCCAGG TGCGGATTGA CTCACAGTTT AACCAGCCCT ATGTCGGGAT TGAGTTCAAC
TCACTGGGGG CACGGTTGTT TGATCAAGTG ACCGCCGCCA ATGTGGGTAA ACGTTTTGCC
ATTGTACTTG ACAGCAATGT TTACTCGGCC CCGGTTATCC GGGAGCGGAT CTCGGGTGGT
TCAGCCCAGA TCTCGGGTAA CTTTACGGAA AAGACCGCCT CGGACCTGGC GATCGTGCTG
CGTGCGGGCG CCCTGCCTGC TCCGGTCAAG ATCATCCAGA ACGTGACGGT CGGCGCGTCA
CTGGGTAAAG ACTCCATCGA CAAAGGTTTG ATGGCCGGTG CCATCGGTGT GGCCCTGGTC
ATCGGCTTCA TGGCGGTCTA CTACAAGCTG TCCGGCATGG TGGCCAACCT GGGTATGGTA
CTGAACATCC TCTACCTGAT GGGGGCCATG TCAGCTCTGG GGGCAACCCT GACGCTGCCC
GGCATTGCCG CTATAGTGTT GCTGGTGGGT ATGTCGGTTG ACTCCAACGT CATTATCTTT
GAACGGATCC GCGAAGAGCT GCGTCTGGGC AAATCACCAA AATCCGCCTT AGAGGCCGGT
TATGACAAGG CCTTTCTGAC CATCATGGAC TCTCACGTAA CCGCCCTGAT TACTGCTGCT
GTGTTGTTCC AGTTTGGTAC CGGTCCGGTC AAGGGGTTTG CGGTCTCCTT GAGTCTTGGT
ATCATGATCA ACCTGTTTAC CTCGTTGATG GGCACCAAGG TGATCTTTGA CCTGTTCCTG
CACAAGGGGA ACGTCAAAAA GATGAGCATA TAA
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| Protein sequence | MPKGTGWRIA LIAAFIVLSC IYLVPTLNPK LPDWWKGMLP KDKIHLGLDL QGGTHLVLEV
ETAKAVEGTL DLVATDLEDT LNSKNLRFKR ISRTGSDKVA IVMYEKDTAA AVQKLVKEKY
RDYEMIPTVE EGGMVGIALR MKEQDIQDRK DKAVAQALET IRNRIDQFGV SEPVIARQGI
NQIVVQLPGI KDPQRAIALI GRTARLEFKM VKEGVSPTGG AVPEDSEVLF EKHTDPVTGA
TTETPLVVYK KALITGDLLT DAQVRIDSQF NQPYVGIEFN SLGARLFDQV TAANVGKRFA
IVLDSNVYSA PVIRERISGG SAQISGNFTE KTASDLAIVL RAGALPAPVK IIQNVTVGAS
LGKDSIDKGL MAGAIGVALV IGFMAVYYKL SGMVANLGMV LNILYLMGAM SALGATLTLP
GIAAIVLLVG MSVDSNVIIF ERIREELRLG KSPKSALEAG YDKAFLTIMD SHVTALITAA
VLFQFGTGPV KGFAVSLSLG IMINLFTSLM GTKVIFDLFL HKGNVKKMSI
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