Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1942 |
Symbol | |
ID | 6366105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 2065999 |
End bp | 2066541 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642677354 |
Product | protein of unknown function DUF177 |
Protein accession | YP_001952178 |
Protein GI | 189425001 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000072056 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGTCA GAACCGAACA TATCAAGGAA ACCGTTCGGG AGTTTTCCTT CAATGAACCG GCAGAGTCAT TTCCGGTCCT TGCCGCAATG ATGGCTGCTG GTGAGTGTCG TTTTACCGGC TCGGTGCAGG TTGCATTAAC AGCCGAACGT GAACTGGACC ATTATCGGGT TGAAGGTACG GTCTCTGTGC CGGTGCAGCT GGATTGTTCC CGCTGCCTCT GCAGCTTTGA TCGTACAGTT TTTTCACGTT TCACCATTTT CTTCCGGGAA GGCGCTGCTG TAAATCGCGA AGAAGAAGAT GAGGTTGAAC TGGAAGAACG GGATCTGATC TCAAGCAGTT TTATCGGTGA CGAGATTGAT CTGATGCCTG AAATCGCGGA ACAGGTTGCC CTGGAGATTC CGCTGAAGCC GCTCTGCTCA GAAAGTTGCA AGGGGCTATG CCCCGTCTGC GGCATTGATC TGAACAGCAG TACCTGTAGT TGTGTCAGTG AACAGAAACA ATCAAAATTT GCTGTTTTAA AGGACTTCAA AGTCCGCCCA TAA
|
Protein sequence | MKVRTEHIKE TVREFSFNEP AESFPVLAAM MAAGECRFTG SVQVALTAER ELDHYRVEGT VSVPVQLDCS RCLCSFDRTV FSRFTIFFRE GAAVNREEED EVELEERDLI SSSFIGDEID LMPEIAEQVA LEIPLKPLCS ESCKGLCPVC GIDLNSSTCS CVSEQKQSKF AVLKDFKVRP
|
| |