Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1930 |
Symbol | |
ID | 6369277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 2054262 |
End bp | 2057510 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642677342 |
Product | UvrD/REP helicase |
Protein accession | YP_001952166 |
Protein GI | 189424989 |
COG category | [L] Replication, recombination and repair [S] Function unknown |
COG ID | [COG0210] Superfamily I DNA and RNA helicases [COG1379] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00120508 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATA TTGCTGACCT GCATATCCAT TCCCCCTTTT CACGGGCCAC CAGCCCGGAC AGCAGTCCGG CTGGACTGGC CGCCTGGGCT CGCCTGAAGG GGATTCAGGT CATCGGCACC GGTGACTGTA CCCATCCCGG TTGGTTCAAG CTGTTGAAAG AGCAGCTGGA GCCTGCTGAA CCAGGTTTTT ACCGCTTGAA AGATGAAAAA ACCATTCCTG ATATCCTGCC TGGTGTGATG CAACCTGACA CCCCGATCCG CTTTCTGCTG TCTGCCGAGA TAAGCTCCAT CTACAAACGG GGCGGGGCAA CCCGCAAGAT CCATAACCTG CTATATCTGC CTGATTTTGC CTCGGTTGAG CGCCTGAACG CCAAACTAGC CGGGATTGGT AATATTGCAT CGGATGGTCG GCCGATCCTG GGGCTGGACA GCCGCGACCT GCTGGAGATC ATGCTGGAAT GTTCACCAGA TGCCTTTCTG GTGCCAGCCC ATATCTGGAC TCCCTGGTTT TCCCTGTTTG GTTCAAAATC AGGTTTTGAC AGCATTGAAG AGTGTTTTGG CGACCTGAGC AGCCATATCT TCGCCCTGGA GACCGGGCTT TCCTCAGATC CTGACATGAA CCGCCTGATC TCGGGGCTGG ATCACTGTGC CCTGATCTCT AATTCAGACT GTCATTCTCC CTCAAAGCTG GGGCGCGAAG CCAATCTGTT CAACACCGGC CTTGATTTTT TCTCCCTGCG CGATGCCTTG AAAAAGAACC AACGCGACAG CTTTTGTGGA ACGGTTGAAT TCTTTCCTGA AGAGGGCAAA TACCACTTTG ATGGTCACCG GGACTGTAAG GTCTGCCTTG ATCCCCATGA AACCCGCCGT TTGCATAACC TCTGTCCAGC CTGTGGTAAA CCGGTTACCG TCGGGGTGCA TCATCGGGTG CTGGAACTGG CAGATCGTGC AAAGCCACAG TATCGCGATG ATGCACCCGT GTTTTACTCC TTGATTCCGC TGCCGGAACT GCTGGGAGAG CTGCTCCAGG TTGGCCCGTC CTCCAAACAG GTCGTCCATC AGTATGGCCG GGCATTGGCT CACTTCGGGT CTGAATTTAA TCTGTTGTTA CATGCAGAAC TGGAACAGAT CAGGAGTTTT GAGCCGCTTC TGGCTGAAGC GGTCAAACGG ATGCGTGAAG GCACCGTAAT CCGTCACCCT GGCTATGACG GCGAATTTGG TGTCATCCGG GTCTTTGAAC AAGGCGAGTT GGCTCAATTG GCAGGGCAGG GGGGGCTGTT CGGTGATCAA CGTGTTCCCA GAAGCCGCAA AAAGCCGCTG TCAGGCCCGT TGCCAAAACA ACTCGCGTCT CCACCCACAA CTGACAACCA GCGGGTTCCA GCCAAGGTAA CCGGTCCGAA CCCTGAGCAG CAGGCAGCCA TTCAGAACGA TGGACAGCGC GTGCTGGTGG CTGCCGGGCC CGGCACCGGC AAGACCTTTA CCTTGGTATC GCGCCTGCAG CGTTTGCTTG ATCAAGGCGC AGATCCCGGT CGTGTTGTTG CAATCACGTT TACAACCCGC ACTGCTGAAG AGATGCGGGA ACGACTTGCA AAGAGTTGCG GGGCAACGGC AGAGGACCTT TTTATCGGCA CCTTTCACCG CTTCTGCCTG GAACAGTTGC GCCAGGACAA TCCAGGTCTG ACCGTGGTTG GGCCGGAAAG TCGCCAGCGG TTGCTGAAGC GCCTTTATGC CGAGCGAGGA GTTGCTGAGC GCAGCAGGAT ATCCAATGCC ATCTCAGCCC ATTGTTCCGG CATTCAGGTG GCCCTGACAG AAGAGACCAA GCTCTATGTG GATGAACTGG TGCGCCTGAA CGCCCTTGAT CTGGATGCCA TTATTCCGGT CTGTGTCCAG CTCATGAATG CCGACGAATC ATTCAAACAA CGGGTGCAAC AGGCTGTGCA GCACCTTTTT GTGGATGAAT TCCAGGACCT GAACCGATCC CAATACGACC TGGTGCAACT ACTGGCGGAA CAGGCTACGG TCTTTGCCAT CGGCGACCCG GATCAGGCCA TTTATGGTTT CAGGGGGGGA GATCTGCGCT ACTTCTTCCG TTTTGCCGAG GTGCCGGACA CGGTTTTGTT GCCGCTCAGG ACCACCTATC GTCTGCCCAG AAAAATCGTG CAGGCTGCCG GCAGTCTGAT CTGTCGCAAC CTGATCTGCA GCGGCTTGCC TCTTTCGGCT GCCGACAATT GTCCGGACGG AGCAATTGAA TTCCACCGGG CCCTCTCTCC GGGAGCTGAA GCAGAACTGA TTGTCAGACG AATTGAGGAG CTGATCGGTG GTGTTGACAG TTTTTCCCGC AGTACTGGCC GAAGTGGCAA CACACCGTCG CCTGACAACC TGAGCTTTGC CGATTTTGCC GTTCTGTTTC GTCTGGGTCG TCAGGCCGAA GAACTTGCTG AGGCGCTCAC TCGTCGTGGT ATACCGTATC AACTGGTAGG AGCAACTCCC TTTTATATGG AGTCCAAGCT TCGCCCCCTG TATCAGCTGT TGCAGGCAGC AAGCGGCAGC GATGAAATAG CCCTCTGGCT AAGTCTTTTT GGGGCTCTGA AGGGGGTGGG GACAACCACC CTTGATCGGC TTGAGTCTGA ACTGCCGCTG AGGGGAGATT TTTTTGAACT GGCGGCTGAA CATGATCATA CCCCAGCAAC AGGCAAGGCC CTCAAACTGC TGGCAACCAC CCTTGACAGG TTGCAAAAAT CAGCAGCTGA CCAGGGCGTC GCAGCTGCCC TGCGTATCTC CTTGCCCGTC TTTGGCCTGG AACTTGATGA TGCGGACCGA CTCCTGCAGA TGGCAGAGGG GTTCGGGACG GATCTCTCCG CCTTCAGTCA CCACCTCAAG CAGTATGCCT CGGCAACGGT TTATGACCCG CGGGCCGAAG CGGTTGCACT GATGTCCTGC CACAGTTCAA AAGGGCTTGA ATTCCCGGTC ATCTTCATGA CCGGCCTTGA AGAGGGGATC TTTCCTTGCA CCTTGATGGG GACCCCCAAT GTGGAGGAAG AGCGCCGGCT CTTTTACGTC GGTCTGACAC GGGCAAAGCA ACGTGTCATC CTGACCGCAT CAGGTTATAG AGGCTGGATG GGGCAGGGCT TGCGCGAGCT TTCACGCTTT ATTACTGAGC TGCCCGCAGA GCTGGTGGAC AAACCGGAAG CAGGCAGGCA ACGCCGCAGA GCCCCAGTAG AATCAGAGGC TCAAATGGAA TTGTTTTAG
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Protein sequence | MNYIADLHIH SPFSRATSPD SSPAGLAAWA RLKGIQVIGT GDCTHPGWFK LLKEQLEPAE PGFYRLKDEK TIPDILPGVM QPDTPIRFLL SAEISSIYKR GGATRKIHNL LYLPDFASVE RLNAKLAGIG NIASDGRPIL GLDSRDLLEI MLECSPDAFL VPAHIWTPWF SLFGSKSGFD SIEECFGDLS SHIFALETGL SSDPDMNRLI SGLDHCALIS NSDCHSPSKL GREANLFNTG LDFFSLRDAL KKNQRDSFCG TVEFFPEEGK YHFDGHRDCK VCLDPHETRR LHNLCPACGK PVTVGVHHRV LELADRAKPQ YRDDAPVFYS LIPLPELLGE LLQVGPSSKQ VVHQYGRALA HFGSEFNLLL HAELEQIRSF EPLLAEAVKR MREGTVIRHP GYDGEFGVIR VFEQGELAQL AGQGGLFGDQ RVPRSRKKPL SGPLPKQLAS PPTTDNQRVP AKVTGPNPEQ QAAIQNDGQR VLVAAGPGTG KTFTLVSRLQ RLLDQGADPG RVVAITFTTR TAEEMRERLA KSCGATAEDL FIGTFHRFCL EQLRQDNPGL TVVGPESRQR LLKRLYAERG VAERSRISNA ISAHCSGIQV ALTEETKLYV DELVRLNALD LDAIIPVCVQ LMNADESFKQ RVQQAVQHLF VDEFQDLNRS QYDLVQLLAE QATVFAIGDP DQAIYGFRGG DLRYFFRFAE VPDTVLLPLR TTYRLPRKIV QAAGSLICRN LICSGLPLSA ADNCPDGAIE FHRALSPGAE AELIVRRIEE LIGGVDSFSR STGRSGNTPS PDNLSFADFA VLFRLGRQAE ELAEALTRRG IPYQLVGATP FYMESKLRPL YQLLQAASGS DEIALWLSLF GALKGVGTTT LDRLESELPL RGDFFELAAE HDHTPATGKA LKLLATTLDR LQKSAADQGV AAALRISLPV FGLELDDADR LLQMAEGFGT DLSAFSHHLK QYASATVYDP RAEAVALMSC HSSKGLEFPV IFMTGLEEGI FPCTLMGTPN VEEERRLFYV GLTRAKQRVI LTASGYRGWM GQGLRELSRF ITELPAELVD KPEAGRQRRR APVESEAQME LF
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