Gene Glov_1869 details

Gene Information

• Locus tag: Glov_1869
• Symbol: thrS
• ID: 6367402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 1990242
• End bp: 1992182
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642677275
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001952105
• Protein GI: 189424928
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.130621
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTTTC TGTTTAAAGA AAGATACATC ATGTCAATGA TCCAAGTGAC GCTGCCGGAT 
AATTCAATAC GTGAACTTGC TGATGGTGCT ACGGTTGCTG ATCTGGCGGC ATCCATCGGC 
GCCGGGCTGG CCAAGGCCGC TTTGGCCGGG CAGGTGAACG GTCTGCTGGT TGATCTTTCA 
ACGCCGCTTG CAGATGGTGA TAATGTTGCC ATTATTACTG AAAAAAGTCC TGAGGCACTT 
GAGATCATCC GACACTCCAC CTCACACCTG ATGGCGCAGG CTGTTAAGGA GCTCTTTCCG 
GCAGCCAAGG TGACCATTGG CCCGGCTGTG GAAAACGGCT TCTATTATGA TTTTGATGTT 
GCCGCGCCCT TTACCCCGGA AGATCTTGAA AAAATTGAGA AGCGGATGGC CGAGCTGGCA 
GCAGCCGGAC AACCGCTCAC ACGCAAGGTG ATGTCTGCTG CAGAGGCGAT CGCTTTTTTT 
GAGCAGATGG GGGAGCCATA CAAGAAGGAG CTGATTGAGG GAATTGGCGC TGAAACGGTC 
TCAATTTACA CGCAGGGGGA ATTCGCTGAT CTCTGTCGTG GCCCCCATGT GCCGAACACC 
AATAAGCTCA AGGCATTCAA GTTGCTTTCC ATAGCCGGTG CGTACTGGCG TGGCGATGAA 
AAGAACCGGA TGCTGCAGCG GATCTATGGC ACTGCCTTTG TGGATAAAAA AGAACTTGAG 
GCGTATCTGC ATCGCCTTGA AGAGGCTAAA CGCCGTGACC ACCGCAAACT GGGGCGTGAG 
CTGGATCTGT TCTCGTTTAA TGATGAGGTT GGAGCCGGTT TTGCTATCTG GCATCCCAAG 
GGGGCTATGC TGCGCACCCT GCTGGAGGAT TTTGAGCGCA AAGAGCACCT GAAGCGCGAT 
TATGATATCG TTGTCGGCCC CCAGATCCTT AAGACGGAGC TCTGGCAGCG TTCCGGTCAC 
TACGACAACT ATCGCGAGAA TATGTATTTT ACTGAGGTGG ATGAGCAGAG CTTTGGTGTC 
AAACCGATGA ACTGTCTCTC CCACATGATG ATTTATAAAT CCCAGTTGCG CAGCTATCGT 
GACCTGCCGC AGCGCTACTT TGAGCTGGGC ACGGTACACC GTCATGAACG GGCCGGTGTG 
CTGCACGGCC TGCTGCGGGT GCGTTGTTTT ACCCAGGATG ATGCCCATAT TCTTTGTACG 
CCGGAGCAGC TTGACGCCGA GATTAAGGGT GTTCTGAAGT TCGTCTCCGA TGTGATGGGG 
ATTTTCGGGT TTGAGTATGA GATGGAACTC TCAACTCGTC CTGAAAAATC AATCGGCAGT 
GATGAAGACT GGGAGCGGGC AACCGGTGCA TTGCTCGGTG CGTTGAAGGA TACCGGGCGG 
GATTTTGAGA TTAATGAAGG TGATGGCGCC TTCTACGGTC CCAAGATTGA CATCAAGCTG 
CGTGATTGTC TTGACAGACG GTGGCAGTGT GCTACTATCC AGTGCGATTT TACCCTGCCC 
GAGCGGTTCG ATCTGACCTA TGTTGCCAGT GACGGAGAAA AAAAGCGTCC CGTTATGGTG 
CATAGGGTTA TCCTCGGTTC AATTGAACGC TTTATTGGCG TATTGATCGA ACATTTTGCC 
GGTAATTTCC CGTTGTGGCT TGCACCAGTG CAGGCTGTTG TGTTAACGGT CACTGATAAT 
CAGATACCCT ATGCTCAAGA GGTGTACAAA CAGCTCAGGA GTGCGGGGAT TCGTGTGCAG 
GAAGATCTGC GGAACGAAAA GCTTAATTTC AAGATTCGTG AAGCACAGTT ACAGAAAATA 
CCGTACATGT TGGTAATTGG TGACAAAGAA GTTGAGCAGG GGACGGTCAC ACCGCGTTTC 
CGTGATGGTA AAAACCTGCA TGCCATGAAG CCGGATGCAT TTATTGCTTT TGTTGAAGCT 
GAAACAAAGG CCTACAAGTA A 

 

Protein sequence

MPFLFKERYI MSMIQVTLPD NSIRELADGA TVADLAASIG AGLAKAALAG QVNGLLVDLS 
TPLADGDNVA IITEKSPEAL EIIRHSTSHL MAQAVKELFP AAKVTIGPAV ENGFYYDFDV 
AAPFTPEDLE KIEKRMAELA AAGQPLTRKV MSAAEAIAFF EQMGEPYKKE LIEGIGAETV 
SIYTQGEFAD LCRGPHVPNT NKLKAFKLLS IAGAYWRGDE KNRMLQRIYG TAFVDKKELE 
AYLHRLEEAK RRDHRKLGRE LDLFSFNDEV GAGFAIWHPK GAMLRTLLED FERKEHLKRD 
YDIVVGPQIL KTELWQRSGH YDNYRENMYF TEVDEQSFGV KPMNCLSHMM IYKSQLRSYR 
DLPQRYFELG TVHRHERAGV LHGLLRVRCF TQDDAHILCT PEQLDAEIKG VLKFVSDVMG 
IFGFEYEMEL STRPEKSIGS DEDWERATGA LLGALKDTGR DFEINEGDGA FYGPKIDIKL 
RDCLDRRWQC ATIQCDFTLP ERFDLTYVAS DGEKKRPVMV HRVILGSIER FIGVLIEHFA 
GNFPLWLAPV QAVVLTVTDN QIPYAQEVYK QLRSAGIRVQ EDLRNEKLNF KIREAQLQKI 
PYMLVIGDKE VEQGTVTPRF RDGKNLHAMK PDAFIAFVEA ETKAYK