Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1856 |
Symbol | |
ID | 6367269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1977189 |
End bp | 1978964 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642677261 |
Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_001952092 |
Protein GI | 189424915 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0012432 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA TTCTATCCGG CAACGAGGCC ATTGCACGGG GCGCCTATGA GGCTGGTTGC CTGGTGGCCA GTGCCTATCC CGGTACCCCT TCCACTGAAA TCCTTGAAAA TGTAATCAAC TACAAAGAGA TTAACGCCTC GTGGGCACCC AATGAAAAGG TGGCTCTTGA GGTTGCGATT GGCGCCTCGT TTGGCGGTGC CCGTGCCCTG GCCTGTATGA AGCACGTCGG GGTCAACGTA GCAGCTGATC CGCTGTTTAC CGCCTCTTAC ACAGGTGTTA AGGGTGGATT GGTGCTGGTG GCTGCCGACG ACCCGGAGAT GCATTCCTCC CAGGATGAGC AGGACAGCCG CAACTATGCC CGTTTTGCCA AGGTGCCGAT GCTGGAGCCG GCTGACTCTC AGGAGTGTCT GGCTTTTACA CGTCTGGCTT TTGATCTGTC CGAACAGTTT GATACCCCGG TCATGTTGCG TAGCTGTACC CGTATCTCCC ACGGCAAGTC GGTGGTTGAG CTGGGTGAAC GCCGCAATGA CCTGCCTGCC CCCAAGCTGG TCAAGGATGC TCCCAAGCTG GTGATGTTGC CGGGTAATGC CCGGGTCCGT CATCCACTGG TTGAAGAGCG CTCGGTCAAG CTGTCGGAAT ATGGTGATAA GGCTGCCGTC AACCGGATGG AGATCCGCTC GGCCGAGATC GGGGTGATCT GTGCCGGCGT GACCTACCAG TATGTGCGGG AGGCGTTGCC TGATGCCAGC GTACTCAAGC TGGGCATGGT CTGGCCCTTG CCCCACAACC TGATCCGAGA GTTCAGCAGC AAGGTCAAGC AGCTGTATGT AGTTGAAGAA CTTGATCCGT TTATTGAGGA TCAGGTCAAG GCTATGGGAA TCAGCTGCCA GGGCAAGGGG CTGACTTCGC TTTGTGGTGA GCTTTCACCG GGCCGGATCC GCGATGTCTT TGCCAAGGCC GGTATCATTC CTGCGGTTGC TGCTGAGGCT GCTGCGGTTG AACCGGTGCC GCCCCGTCCG CCTAACATGT GTCCCGGCTG CCCGCACCGT GGTCTGTTCT ATGAGCTGAA CCGGGCCAAC GCCTATGTAA CCGGTGATAT CGGCTGCTAC ACCCTGGGCT TTATGCCGCC GCTGAATGCC ATGGACACCT GTGTCTGTAT GGGGGCCTCC ATCAGTATGG GCTCCGGCAT GGTACGGGTA CTGCCTCCTG AAGAACAGAA GCGCGTGGTT GCGGTGATCG GTGATTCCAC TTTCCTGCAC ACCGGTGTCA ACTCCCTGAT GGAGATGGCC TGGAACAAGG CGCCAGCCAC GGTAATCATC CTGGATAACC GGATTACTGC CATGACCGGA CGTCAGGAAA ACCCGGCCTC CGGATTTACC CTGTCCGGCG AGCAGGCTGA AGAGGTAAAT ATTCCTGAGC TTTGCAAGGC GCTGGGGATC AAGCATGTGC GTACCGTAGA TCCCTATGAT CTGGATGCAA CCCGTCAGGC AATCCGCGAG GAGATGGAGC GCCCTGAACC ATCGGTGGTC ATCACCAATC GCCCCTGTGT GCTGATCAAG GGGGCTGGCC GCTTTGAAAA AGGTACCATC CTTGAAGTTG ATCAGGGTAA GTGTACCGGC TGCAAGGCCT GTCTGCGGAT CGGATGCCCG GCCATTGAGT GGAAACCCAG CCCGGACGGC AACAAGGGCA AGGCCTTTAT TGACCCGCAG CTCTGTACCG GTTGTACGGT CTGTCAGCAG CTCTGTAAAT TCAATGCCAT CGGGGGGAGA AAGTAA
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Protein sequence | MKEILSGNEA IARGAYEAGC LVASAYPGTP STEILENVIN YKEINASWAP NEKVALEVAI GASFGGARAL ACMKHVGVNV AADPLFTASY TGVKGGLVLV AADDPEMHSS QDEQDSRNYA RFAKVPMLEP ADSQECLAFT RLAFDLSEQF DTPVMLRSCT RISHGKSVVE LGERRNDLPA PKLVKDAPKL VMLPGNARVR HPLVEERSVK LSEYGDKAAV NRMEIRSAEI GVICAGVTYQ YVREALPDAS VLKLGMVWPL PHNLIREFSS KVKQLYVVEE LDPFIEDQVK AMGISCQGKG LTSLCGELSP GRIRDVFAKA GIIPAVAAEA AAVEPVPPRP PNMCPGCPHR GLFYELNRAN AYVTGDIGCY TLGFMPPLNA MDTCVCMGAS ISMGSGMVRV LPPEEQKRVV AVIGDSTFLH TGVNSLMEMA WNKAPATVII LDNRITAMTG RQENPASGFT LSGEQAEEVN IPELCKALGI KHVRTVDPYD LDATRQAIRE EMERPEPSVV ITNRPCVLIK GAGRFEKGTI LEVDQGKCTG CKACLRIGCP AIEWKPSPDG NKGKAFIDPQ LCTGCTVCQQ LCKFNAIGGR K
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