| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1761 |
|---|
| Symbol | hisS |
|---|
| ID | 6368169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 1875194 |
|---|
| End bp | 1876453 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642677166 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_001951997 |
|---|
| Protein GI | 189424820 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.210094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATAA CCGGTATCAA GGGCTTTAAT GATCTTTTAC CCGCAGAATC AGGTCTTTGG
CAGTTTATTG AACAAACGGC CCGACAGGTC TTTGCACGCT ACGGTTTTAA CGAGATCCGT
GTGCCGATCG TTGAAAAAAC CGAGCTGTTT TGCCGCTCAA TTGGTGATAC CACCGATATT
GTTGAAAAGG AGATGTATAC CTTTATGGAC AAGGGGGGCA GCAGTCTGAC CCTGCGGCCT
GAGGGAACGG CCAGTGTGAT GCGGGCATTG ATCGAGCATA AATTGTACGC CCTGGATAGT
ATCAACAAGC TCTACTATAT GGGCCCCATG TTTCGCCACG AACGTCCCCA GAAAGGGCGT
TACCGCCAGT TCCATCAGAT TGGAGCCGAG GTGACCGGTG CTGCGGACCC GCTGATTGAT
GCCCAGGTGC TGTTGATGGT CAGTCGTCTG TTTCAGGAGT TCGGGTTGAC CGAGCCGCGG
CTGCAGATCA ATTCATTGGG ATGCCCGGCC TGCCGCCCGG CCTATCGGCA AGCCCTGGTG
GCCTTTCTGG CGGAACGTCA GGAAGCGCTT TGTGAAGACT GTCGTCGGCG TCAGGGCACC
AATCCCTTGC GGGCACTGGA TTGCAAGGTT CCCGGATGTA TCGAGGCCAC GCAAGGTGCC
CCTGCCATGG TCGAACACCT CTGTAACGAG TGTGATCAGC ATTTCAGCAT GGTCCAAAAC
TACCTGACAG CCGCAGAAGT GCCGTTCAGC CTCAATCCCC GTATGGTCAG AGGACTCGAT
TACTACACCC GTACCACCTT TGAGCTGGTA ACCGGCCTGC TGGGTGCTCA GTCAGCAGTG
GCAGCCGGCG GGCGGTATGA TGGCCTGGTG GAGCAGCTTG GCGGGCCTGC CGTGCCTGGT
ATCGGTTTTG CCCTTGGCGT GGAGCGGGTG GCATTGTTGC TTGGCGACCG CAGTTTTGAA
AAAACGCCGG ATCTGTTCAT TGCTGTCATG GGTGATGCTG CCCGGACAGC AGGTTTTCGT
CTGATGGCAG CCCTGCAGGA TCAAGGATTC TGGGTAGAAA CTGATTGTGA GGGGAAAAGT
CTGAAAAGTC AGATGCGGCG GGCTGACAAG CTGAAATCCC GTTACAGTAT TGTGTTGGGG
GATACCGAGC TGGTTGCCGG CAGCGGGACG TTAAAGCGGA TGGCGGACGG CAATCAGCAG
CCGGTACATC TTGAAGCGGC AACTATTGCA GCAGCTATCA CAGGAGGTGG GCAGACATGA
|
|---|
| Protein sequence | MSITGIKGFN DLLPAESGLW QFIEQTARQV FARYGFNEIR VPIVEKTELF CRSIGDTTDI
VEKEMYTFMD KGGSSLTLRP EGTASVMRAL IEHKLYALDS INKLYYMGPM FRHERPQKGR
YRQFHQIGAE VTGAADPLID AQVLLMVSRL FQEFGLTEPR LQINSLGCPA CRPAYRQALV
AFLAERQEAL CEDCRRRQGT NPLRALDCKV PGCIEATQGA PAMVEHLCNE CDQHFSMVQN
YLTAAEVPFS LNPRMVRGLD YYTRTTFELV TGLLGAQSAV AAGGRYDGLV EQLGGPAVPG
IGFALGVERV ALLLGDRSFE KTPDLFIAVM GDAARTAGFR LMAALQDQGF WVETDCEGKS
LKSQMRRADK LKSRYSIVLG DTELVAGSGT LKRMADGNQQ PVHLEAATIA AAITGGGQT
|
|---|
| |