Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1749 |
Symbol | |
ID | 6368937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1860630 |
End bp | 1861733 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642677154 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_001951985 |
Protein GI | 189424808 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.294352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACAT CAGACATTGC ATACATGAAG CGGGCGATTT CCCTTGCACG GAAAGGGTTA GGCAGGACTG CTCCCAATCC GGCTGTAGGC TGTGTGATTG TGTGCGACGG GGTGATTGTG GGGGAGGGGT GGCATAAAAA GGCCGGTACC CCCCATGCCG AGGTGCATGC CCTGGCCATG GCCGGTGCTG CAGCCAAAGG GGCTGATGTC TATGTGACGC TTGAGCCCTG CTGCCATCAC GGTAAGACTC CACCCTGTTG CGATGCGTTG ATCGCCGCAG GTGTGCGGCG GGTGGTGGCC GGCATGGTTG ATCCCTTTCT GCAGGTGGCC GGCAAAGGAT TGCAGACTTT GCGTCAGGCC GGTGTCCGGG TTGAAGTGGG GTTGCTGGAA CAGCAGTGCA AGGAGTTGAA CAAGGGGTTT ATCAAGTCTG TCACCACCGG TATGCCGTAC CTGCTCTACA AGACCGCCAT GACCATGGAC GGTAATATTG CCACTGTCAC CGGACATTCC CGCTGGGTCA CCGGTGAGGA GTCCCGGCGT CTGGTGCATC GCCTGCGTGC TCACTGTGAT GCCGTCATGG TGGGGGTGGA TACGGTGATT GCAGACAACC CGCAATTGAC GGTCCGGCAT GTCAGGGGGA GAGATCCGCT GCGGGTGATT GTGGATACCC GCTTGCGTAC TCCGGAAAGC GTTAACGTAC TGAATGGCAC TGATGCCGGT AGAACCGTGA TTGCCACCTG TGAGACAAAT CCTGATATTC ATCAGCGCTA TTTGTCGCAG GGAGCGGACA TACTGGTCTG CCGGGAATAT GACGGCCGGG TTGAAATGAC TGATCTGCTG CGCAAACTGG CTGTCAGGGG GGTGCAGAGC ATTCTGGTGG AGGGCGGCAG CCGTCTGGCA GGCGATCTGT TGCAGCGCAA TCTGATTGAT GAATGTATTT TTTTCTATGC TCCAAAGGTA GTGGGGAACG GTTTTGCTCC CTTTGCCATA CAAGGAATAA GTACCATGGA TGAAGCCATT CAACTAGAGG TGCAGCGGGT TGGCATGTCC GGCCCCGACG TGGTGGTGTA TGCCAGGCCG GTGGGTGTAT GTTTACCGGT CTGA
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Protein sequence | MSTSDIAYMK RAISLARKGL GRTAPNPAVG CVIVCDGVIV GEGWHKKAGT PHAEVHALAM AGAAAKGADV YVTLEPCCHH GKTPPCCDAL IAAGVRRVVA GMVDPFLQVA GKGLQTLRQA GVRVEVGLLE QQCKELNKGF IKSVTTGMPY LLYKTAMTMD GNIATVTGHS RWVTGEESRR LVHRLRAHCD AVMVGVDTVI ADNPQLTVRH VRGRDPLRVI VDTRLRTPES VNVLNGTDAG RTVIATCETN PDIHQRYLSQ GADILVCREY DGRVEMTDLL RKLAVRGVQS ILVEGGSRLA GDLLQRNLID ECIFFYAPKV VGNGFAPFAI QGISTMDEAI QLEVQRVGMS GPDVVVYARP VGVCLPV
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