| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1578 |
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| Symbol | |
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| ID | 6367722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1670067 |
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| End bp | 1671962 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642676976 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001951814 |
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| Protein GI | 189424637 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGATA GAGCAACGGA TCGTAGCCAG GAGTTGATCG GCTATATCCG GGCAAAGACC
AACCGGTTGC TGGAGGTGAT GGGAACGGTA CCGCTGAATC CGGAGGAGCT GGATGACGCT
ACCTTACTGG CAGTGGACCC GATCGGGATT GTTACCGACT CCTTTGAACA GGTACTGGAG
CACCTTCAGA AGACCAACAG CGAATTAGCC GCCACCAGGG ATGAGTTGCA GGCGATCTTT
GATTCCGCCG GGGGCGCTAT TGTGGTGGTT GATGAGAAGA TGGAGGTGGT GGCCTGCAAT
TCTTACAGTC AGTGGGCCTT GTTTGCCGGT GAACGTAACG TAATGGGTAA AAACCTGCGT
TCCCTGATCT GCGGCCATGA TCAGGAGGAA TGCATCCTGG AACAGATTCT GACCACTCAA
CGCCGGGTTG AACAGAACGA TTTTCTTCAT GACGGACGCC ATTATCATCT GGTGGGGACA
CCGCTGAAAA ATCACGATGG TGCCATCAGC AGGGTGGTAC TGCTCTATAC CGATATTACC
GAGCGTCGTG CCGCTGCGGA AGAAATTGAA CGCTTAGCCT TCTTTGACAG TCTGACCGGC
CTGCCCAACC GGGTGCTGCT AAAGGATCGG TTGGCTCAAC TTTTGACCAG GGCCGGACGC
TACAATGAAA TGGTGGCAAT CCTCTTCATC GATCTGGACC GTTTTAAGGA AGTAAACGAT
ACCCTGGGGC ACGGCACGGG GGATCAACTG TTGCAGGTAG TGTCCGAACG GCTGACCGCC
TGTCTGCGTA GCTGCGATAC CGTGGCTCGT CTGGGGGGGG ATGAGTTTGT CGTGCTGCTG
CCGGGTATTA CCGAGCGCGA CTGCGTCGGC GATATTGCGG CAAAACTGCT GCAGTCGCTG
TGCAAACCGG TGCAGTTGGA TGCGCGAGAA GTCTTTACCA GTGGGAGTAT CGGTATCTCG
CTCTGGCCGA TTGATGGCGA TTCGGTAAGT ACGCTGTTTA AGAATGCCGA TACGGCCATG
TATCACGCCA AGGAACAGGG CAGAAATACC TATCGTTTTT ACACGCCTCA GATGCACGCC
ACTTCTATGG AACAGCTGAC CCTGAGCAAC GATCTGCGCT ACGCCTTGGA ACGGGGAGAG
TTACATCTTT GCTATCAGCC TCAGGTCAGC TTTGAGACCG GTGGACTGAT CGGCGTAGAG
GCACTGCTGC GCTGGATTCA TCCAAAGCTC GGTATGATTC CGCCTGATCG CTTTATCCCT
TTGGCCGAAG ATACCGGTTT GATCGTGCCG ATCGGGACCT GGGTGTTGCA CGAAGCCTGT
CGGCAGGCCA TGATGTGGGT AGCCCAAGGC CTGCCATCAC TGCGGGTGGC GGTTAATATC
TCGGCCAAAC AGTTCCGGGA GTCAGATTTC AGCGATACGG TCAAGGCAGT CCTGCAGACG
ACCGGACTGG CGCCCAACCT GCTGGAGCTT GAACTGACCG AAGGGATGCT GATTGAAAAT
GTTACCCAGA CCAAGTTGAC CCTGCAGAGT TTAAAGGATA TGGGAGTGAC TCTGGCCATC
GATGATTTCG GCACCGGTTA CAGTTCACTC AGCTACCTGA AGCATTTCCC GCTTGACCGG
TTAAAGATCG ACAAGTCCTT TGTGAAGGAG ATTGCAGAGA AGTCAGGTGA CGCTGCTGCC
ATCGTTGAAG CTGTGGTGGC TCTGGGGCAC AGCCTCAAGC TGACCGTGAT TGCCGAAGGA
GTGGAACAGC AGGATCAGGT GGATTTTCTG CACAACCGCA AGTGTGATGA ACTACAGGGC
TACTTCTTCA GCCGTCCCCT CACACCCCAG GCCTTGGAAG AACTGCTCCG CAAAGGAGTG
AATGGGCCGG AGTTCTGTCT TTACCGCTAC CAGTGA
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| Protein sequence | MQDRATDRSQ ELIGYIRAKT NRLLEVMGTV PLNPEELDDA TLLAVDPIGI VTDSFEQVLE
HLQKTNSELA ATRDELQAIF DSAGGAIVVV DEKMEVVACN SYSQWALFAG ERNVMGKNLR
SLICGHDQEE CILEQILTTQ RRVEQNDFLH DGRHYHLVGT PLKNHDGAIS RVVLLYTDIT
ERRAAAEEIE RLAFFDSLTG LPNRVLLKDR LAQLLTRAGR YNEMVAILFI DLDRFKEVND
TLGHGTGDQL LQVVSERLTA CLRSCDTVAR LGGDEFVVLL PGITERDCVG DIAAKLLQSL
CKPVQLDARE VFTSGSIGIS LWPIDGDSVS TLFKNADTAM YHAKEQGRNT YRFYTPQMHA
TSMEQLTLSN DLRYALERGE LHLCYQPQVS FETGGLIGVE ALLRWIHPKL GMIPPDRFIP
LAEDTGLIVP IGTWVLHEAC RQAMMWVAQG LPSLRVAVNI SAKQFRESDF SDTVKAVLQT
TGLAPNLLEL ELTEGMLIEN VTQTKLTLQS LKDMGVTLAI DDFGTGYSSL SYLKHFPLDR
LKIDKSFVKE IAEKSGDAAA IVEAVVALGH SLKLTVIAEG VEQQDQVDFL HNRKCDELQG
YFFSRPLTPQ ALEELLRKGV NGPEFCLYRY Q
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