Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1553 |
Symbol | |
ID | 6367385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1646375 |
End bp | 1647814 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642676951 |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_001951789 |
Protein GI | 189424612 |
COG category | [C] Energy production and conversion |
COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCCC AAACTGAAAC GCCTAATTCC AGAACCATCC GGATTGACCC GGTGACCCGT ATCGAAGGCC ATGCCAAGGT CTTTGTCAAT CTGGCTGAAG ATGGTTCTCT TGATAATGCC GGACTGGTGG TAAACGAGCT GCGCGGTTTT GAGAAGATCC TGGTGGGGAT GGAGGCTAAC CGGATGCCCC ACATTACGGC CCGGATCTGC GGGGTCTGTC CTACGGCCCA CCATATTGCC GCCTCCAACG CCCTTGACCA TGCCTGTGGT GTGGTTGCCC CACCGGCTGC CATGCTGCTG CGGGAGCTGA TGTATATGGG GCATATCATT CACTCCCACG CCCTGTCCCT GTTTGTGCTG CAGGGGCCCG ATCTGGTGCT GGGGCTGGAT GCTGATCCGG CCATCCGCAA TGTGGTGGGG ATTGTCCAGG CTAACCCCGA GGTGGCGAAA AAGGCGCTAC GGATCAGGAC CGTCGGTCAA CGTCTGAACG AGATTGTCGG TGGGCGTGGT ACCCATCCGG TTACCTCGGT GGCCGGCGGT ATTACCTTTG TGTTGGATAG TGAAAAACGT GCCATGCTGC AGAGTCTGGT GGATGAAGGC AAGCAGCTTG CCAAGGATCT GGCACCGGTG GTCAAGCAGT TGGTGGTGAC CATGCTGGAA AGGCACCCGG CCATGCTGAC CGATTGGGTT GCCCCTTCCT GGAGTGTGGG CACGGTGCTG GATAACCGGG TCTCACTGAT TCAAGGGAAC ATCCGTGCGG TTGACGAAAA CGGTATCACC CAGGTTGAGT TCCCGGTGCA GGACTATGAC AAGTACATGG TTGAGTCGGT GGTTGACTTC TCCTACATGA AGCGGGTCGG CTTTAAGAAG GGTGGCCTGC TGCATGACTA CCGGGTTGGT CCCCTGGCCA GAATCAATGC CATGCAGCAG TTCAGCACCG AATGGGCCAA CCGTGAGATG GAAGAGATGC TCAAACTGGG CGGCTATCCC TGCCACATCA CCCTGTTTCA GGCCTATGCC AAACTGGTTG AGATGATCTG GGCCATTGAA CGGGCAGACG ATATCCTGCG TGACCCGGCA GTAAACGGCG AGACACGGGT ACCGGTCAAG TTTCAGGGCG GTCGCGCTGT CGGTCATTCC GAGGCACCTC GCGGCACCCT GATCCATGAC TATGAGATTG ATGAAGACGG CATTGTGCGG GCAGCCAACC TGATTGTTGC CACCCAGCAG AATTACGCCA TCATCAACCG TTCCATTGAG CATGCCGCCA AGTCTCACGT TATCGGAAAG AGTGATGATC AGGCCCTGTT AAATGCCATT GAGTTCAGCA TCCGCTGTTA TGATCCCTGT CTTTCTTGCG CCACCCATGC CGTGGGGGCC ATGCCGATGG AGATCAGCAT CAACCGTGGC GGCCGGACCG TCAAAACCAT CAGGAGGTAG
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Protein sequence | MSAQTETPNS RTIRIDPVTR IEGHAKVFVN LAEDGSLDNA GLVVNELRGF EKILVGMEAN RMPHITARIC GVCPTAHHIA ASNALDHACG VVAPPAAMLL RELMYMGHII HSHALSLFVL QGPDLVLGLD ADPAIRNVVG IVQANPEVAK KALRIRTVGQ RLNEIVGGRG THPVTSVAGG ITFVLDSEKR AMLQSLVDEG KQLAKDLAPV VKQLVVTMLE RHPAMLTDWV APSWSVGTVL DNRVSLIQGN IRAVDENGIT QVEFPVQDYD KYMVESVVDF SYMKRVGFKK GGLLHDYRVG PLARINAMQQ FSTEWANREM EEMLKLGGYP CHITLFQAYA KLVEMIWAIE RADDILRDPA VNGETRVPVK FQGGRAVGHS EAPRGTLIHD YEIDEDGIVR AANLIVATQQ NYAIINRSIE HAAKSHVIGK SDDQALLNAI EFSIRCYDPC LSCATHAVGA MPMEISINRG GRTVKTIRR
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