Gene Glov_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_1553 
Symbol 
ID6367385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp1646375 
End bp1647814 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content57% 
IMG OID642676951 
Productnickel-dependent hydrogenase large subunit 
Protein accessionYP_001951789 
Protein GI189424612 
COG category[C] Energy production and conversion 
COG ID[COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCC AAACTGAAAC GCCTAATTCC AGAACCATCC GGATTGACCC GGTGACCCGT 
ATCGAAGGCC ATGCCAAGGT CTTTGTCAAT CTGGCTGAAG ATGGTTCTCT TGATAATGCC
GGACTGGTGG TAAACGAGCT GCGCGGTTTT GAGAAGATCC TGGTGGGGAT GGAGGCTAAC
CGGATGCCCC ACATTACGGC CCGGATCTGC GGGGTCTGTC CTACGGCCCA CCATATTGCC
GCCTCCAACG CCCTTGACCA TGCCTGTGGT GTGGTTGCCC CACCGGCTGC CATGCTGCTG
CGGGAGCTGA TGTATATGGG GCATATCATT CACTCCCACG CCCTGTCCCT GTTTGTGCTG
CAGGGGCCCG ATCTGGTGCT GGGGCTGGAT GCTGATCCGG CCATCCGCAA TGTGGTGGGG
ATTGTCCAGG CTAACCCCGA GGTGGCGAAA AAGGCGCTAC GGATCAGGAC CGTCGGTCAA
CGTCTGAACG AGATTGTCGG TGGGCGTGGT ACCCATCCGG TTACCTCGGT GGCCGGCGGT
ATTACCTTTG TGTTGGATAG TGAAAAACGT GCCATGCTGC AGAGTCTGGT GGATGAAGGC
AAGCAGCTTG CCAAGGATCT GGCACCGGTG GTCAAGCAGT TGGTGGTGAC CATGCTGGAA
AGGCACCCGG CCATGCTGAC CGATTGGGTT GCCCCTTCCT GGAGTGTGGG CACGGTGCTG
GATAACCGGG TCTCACTGAT TCAAGGGAAC ATCCGTGCGG TTGACGAAAA CGGTATCACC
CAGGTTGAGT TCCCGGTGCA GGACTATGAC AAGTACATGG TTGAGTCGGT GGTTGACTTC
TCCTACATGA AGCGGGTCGG CTTTAAGAAG GGTGGCCTGC TGCATGACTA CCGGGTTGGT
CCCCTGGCCA GAATCAATGC CATGCAGCAG TTCAGCACCG AATGGGCCAA CCGTGAGATG
GAAGAGATGC TCAAACTGGG CGGCTATCCC TGCCACATCA CCCTGTTTCA GGCCTATGCC
AAACTGGTTG AGATGATCTG GGCCATTGAA CGGGCAGACG ATATCCTGCG TGACCCGGCA
GTAAACGGCG AGACACGGGT ACCGGTCAAG TTTCAGGGCG GTCGCGCTGT CGGTCATTCC
GAGGCACCTC GCGGCACCCT GATCCATGAC TATGAGATTG ATGAAGACGG CATTGTGCGG
GCAGCCAACC TGATTGTTGC CACCCAGCAG AATTACGCCA TCATCAACCG TTCCATTGAG
CATGCCGCCA AGTCTCACGT TATCGGAAAG AGTGATGATC AGGCCCTGTT AAATGCCATT
GAGTTCAGCA TCCGCTGTTA TGATCCCTGT CTTTCTTGCG CCACCCATGC CGTGGGGGCC
ATGCCGATGG AGATCAGCAT CAACCGTGGC GGCCGGACCG TCAAAACCAT CAGGAGGTAG
 
Protein sequence
MSAQTETPNS RTIRIDPVTR IEGHAKVFVN LAEDGSLDNA GLVVNELRGF EKILVGMEAN 
RMPHITARIC GVCPTAHHIA ASNALDHACG VVAPPAAMLL RELMYMGHII HSHALSLFVL
QGPDLVLGLD ADPAIRNVVG IVQANPEVAK KALRIRTVGQ RLNEIVGGRG THPVTSVAGG
ITFVLDSEKR AMLQSLVDEG KQLAKDLAPV VKQLVVTMLE RHPAMLTDWV APSWSVGTVL
DNRVSLIQGN IRAVDENGIT QVEFPVQDYD KYMVESVVDF SYMKRVGFKK GGLLHDYRVG
PLARINAMQQ FSTEWANREM EEMLKLGGYP CHITLFQAYA KLVEMIWAIE RADDILRDPA
VNGETRVPVK FQGGRAVGHS EAPRGTLIHD YEIDEDGIVR AANLIVATQQ NYAIINRSIE
HAAKSHVIGK SDDQALLNAI EFSIRCYDPC LSCATHAVGA MPMEISINRG GRTVKTIRR