| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1416 |
|---|
| Symbol | |
|---|
| ID | 6365913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1461750 |
|---|
| End bp | 1464152 |
|---|
| Gene Length | 2403 bp |
|---|
| Protein Length | 800 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642676819 |
|---|
| Product | EcoEI R domain protein |
|---|
| Protein accession | YP_001951657 |
|---|
| Protein GI | 189424480 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTA AGAAAAATCT TTCAGAACGC GATATCTGCA CCCAGTACAT TGTGCCTGCC
CTGAAAAAGG CCGGGTGGGA TATCGAGCGT CAGGTACGAG AGGAGGTTTC TTTCACCGAT
GGTCGCATCT ACGTGCGCGG CACTAGCTCT GCTCGTGGTA GCCGCAAGCG GGCTGACTTT
ATCCTCTACT ACAAGCCGAA TATCCCCATT GCCGTCATAG AGGCCAAGGA CAACAGCCAT
AACGTGGGCG ACGGCATGCA GCAGGCTCTT GGCTATGCTG CAACCCTTGA TATCCCGGTA
GCATTCAGTT CCAACGGTGA CGGGTTCGTG GAACATGACC GCACTGGTTC ATCCGGCAGT
GTAGAGCGCA CGCTCCACCT TGATGATTTC CCCTCTCCTG AAGAACTCTG GCAACGCTAC
AAAACATACA AAGGGATTGA TACCCCGCAT CAGGAACAGA TTGCCTCTTT TGACTACTTC
TATGATGGTT CCGGCCGGGC GCCCCGCTAC TACCAGCAGA TAGCCATTAA CCGCTCCGTC
GAAGCAATTG CTAAAGGGCA AGACCGGATT CTACTGGTCA TGGCCACCGG CACCGGCAAG
ACCTACACCG CCTTTCAGAT CATCCACCGT CTCTGGAAGA GTGGCACCAA GAAACGCATC
CTGTTCCTGG CCGACCGTAA TGCCTTGATC GACCAGACCA AACGGGGCGA CTTCAAGCAT
TTCAAGGACC GAATGACGGT CATCCGCAAG AAGAAGATCG ACAAGGCCTT TGAGATTTAT
CTTGCCCTTT ATCAGGGGTT GACCAATTAC GACGAGGATT CAGACGCCTA CCGGGAGTTC
AGCCCGGATT TCTTTGACCT GATCGTGGTG GATGAATGCC ACCGTGGCAG CGCATCCGCT
GACAGCGCCT GGCGGGAGAT TCTGGACTAC TTCAAAAGCG CCACTCATAT CGGTCTCACC
GCCACACCGA AGGAAACCAA GACCGTCTCC AATATTGAAT ACTTCGGCGA ACCGCTCTAC
ACCTACTCCC TCCGGCAAGG GATTGCCGAT GGTTTTCTCG CTCCTTACAA AGTGCTCCGT
GTCGGCCTTA ACATCGACCT GGAAGGGTGG CGGCCGGAAG AAGGTCAACT GGATGCCGAC
GGCAATCCGG TGGACGACCG GCTCTACAAC ACCAAGGATT TCGACCGTAA CCTAGTCATT
GATGAACGTA CCAGGACTAT TGCCCGCAAG GTGACGGAGT TTCTCAAAAA GACCGACCCC
TTCGACAAAA CCATTGTTTT CTGTGTCGAT ATCGAACACG CCACTCGTAT GCGCCAAGCT
CTGGCCAACG CCAATCCTGA AGAGGTACTG AAGAATCATA AGTATGTCAT GAAGATCACC
GGCGATGACG ATGACGGCAA GCGGGAGCTG GATAATTTCA TCAACCCCGA AGAGCGCTAC
CCGGTCATTG CTGTGACCTC CAAACTGATG ACCACCGGCG TCGATGCCCA GACCTGCAAA
TTGATTGTGC TTGATTCCAA TATCAATTCC CCGACTGAGT TCAAGCAGAT CATTGGACGT
GGTACGCGCA TCAACGAGGA GTTCGGCAAG CGCTACTTCA CCATCATGGA TTTCCGCAAC
GTGACCGACC TGTTTGCCGA TCCGGATTTT GACGGCGACC CGGTCATGGT GAAGCAACTG
CTGGCAGATG ATGAACTGAC CGAAGCCGAT ATCCATCCCG AAGACGAGCC GGTCGTGGAT
GAAGAAACCG GGGACGAAAT CCCCTTTGGT GATGACAAAC CGGAAGTGAC CTATGACCGC
CCGGAGATCA TCGATGGCGG CGGCATTGTG GCCGAGCCCC TACCAAAGAT CTATGTGGCT
GGTGTCGATG TCTCGATCCT CAATGAGCGG GTGCAGTATC TGGGGGCCAA CGGCAAGCTC
ACCACCGGCA GCCTGAAGGA GTTCACCCGC ACCGGCCTAC TGAATGAGTT CCGCACGCTC
GATGACTTCC TGTCCCGCTG GAACAGTGCC GAAAAGAAGA AAGCGGTGAT CGACCAGCTG
GCTGAGCATG ACATTATTCT GGAAAATCTG CTGGATGAGA CAAAGAAGGA GCTGGACCTG
TTCGACCTGA TCTGCCACAT CGCCTGGGAT CGGCCAGCAC TTACCAGAAG AGAAAGAGCC
GAGCAGGTAA CAAAACGTGA TTACTTCACG CGGTATGGTG ACAATGCCCG TCAAGTCTTG
CAGGCGCTAC TGGAAAAATA CGCCAAAGAC GGTATCGAGA ACATCGAAGA GATGAAGGTG
CTGACCATTG ACCCGTTCAA GGCAATCGGC ACCCCGGCTG AGATCGTCCA TCTCTTCGGC
GGCAAGGAAG CCTATCAGGC GGCAGTGAGA GAGCTGGAAA CTGAAATTTA CAGGATGGCG
TAA
|
|---|
| Protein sequence | MTSKKNLSER DICTQYIVPA LKKAGWDIER QVREEVSFTD GRIYVRGTSS ARGSRKRADF
ILYYKPNIPI AVIEAKDNSH NVGDGMQQAL GYAATLDIPV AFSSNGDGFV EHDRTGSSGS
VERTLHLDDF PSPEELWQRY KTYKGIDTPH QEQIASFDYF YDGSGRAPRY YQQIAINRSV
EAIAKGQDRI LLVMATGTGK TYTAFQIIHR LWKSGTKKRI LFLADRNALI DQTKRGDFKH
FKDRMTVIRK KKIDKAFEIY LALYQGLTNY DEDSDAYREF SPDFFDLIVV DECHRGSASA
DSAWREILDY FKSATHIGLT ATPKETKTVS NIEYFGEPLY TYSLRQGIAD GFLAPYKVLR
VGLNIDLEGW RPEEGQLDAD GNPVDDRLYN TKDFDRNLVI DERTRTIARK VTEFLKKTDP
FDKTIVFCVD IEHATRMRQA LANANPEEVL KNHKYVMKIT GDDDDGKREL DNFINPEERY
PVIAVTSKLM TTGVDAQTCK LIVLDSNINS PTEFKQIIGR GTRINEEFGK RYFTIMDFRN
VTDLFADPDF DGDPVMVKQL LADDELTEAD IHPEDEPVVD EETGDEIPFG DDKPEVTYDR
PEIIDGGGIV AEPLPKIYVA GVDVSILNER VQYLGANGKL TTGSLKEFTR TGLLNEFRTL
DDFLSRWNSA EKKKAVIDQL AEHDIILENL LDETKKELDL FDLICHIAWD RPALTRRERA
EQVTKRDYFT RYGDNARQVL QALLEKYAKD GIENIEEMKV LTIDPFKAIG TPAEIVHLFG
GKEAYQAAVR ELETEIYRMA
|
|---|
| |