Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1399 |
Symbol | |
ID | 6368467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1439261 |
End bp | 1441246 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642676801 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_001951640 |
Protein GI | 189424463 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00201971 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAC TGTTAGTTGC TATCGGTTGC GTACTCTCCC TGAGCTTCGC CGCCTATGCC GAGCCTGCCA AGGCTCCGGC CGCTCCTGAG GCCAAGCCTG CGGTTGCCGC TCCGGCAGCT ACTGTTGCGC TCGCTGCAGA TGCTGCCAAG GTTGCCGCTC CTGCTCCGGC AAAACCGGCT GAAGAGAAAA AGGCAAGCCT GAAGGCCAAC CCCAAAGTTA CGATTCCGAT CTTCCTGGCT ATTATCGGCG CAACCATGGC GGTTGTGGTC TGGTCAGCCA AGCAGACCAA GTCGGCTGCC GACTTCTACA CCGCCGGTGG TGGTATCACC GGTACCCAGA ACGGTTGGGC GATTGCCGGT GACTACATGT CGGCTGCCTC ATTCCTGGGT ATTTCCGGCA TGATCTCCCT GTACGGCTAT GACGGCTTCA TGTACTCGGT GGGCTGGCTG GTTGCCTACA TCACCGTGCT CTTGATCGTT GCCGAGCCTT GCCGTAACGC CGGTAAGTAC ACCCTGGGTG ACATCCTTTC CTTCCGTACG TCACCCAAGC CGGTCCGTGC CGTTGCTGCC ATCTCCACTG TGTCGGTTTC CACCTTCTAC CTGACCGCTC AGATGGTTGG TGCCGGTAAA CTGATGCAGC TGCTGCTGGG GGTACCGTAC AAGACCGCTA TCATCGGCGT TGGTATTCTG ATGGTTGGCT ACGTTGTGTT CGGTGGTATG ACCGCCACCA CCTGGGTTCA GATCATCAAG GCCGGCCTGC TGATGACCGG TGCTGCCCTG CTGTCGATTC TTGTCTCCAT TAAATCCGGT TTCAGCCCGC TGCAGTTCTT TACCGATATC GCCACCAATC AGAACATCAT TGACCATGTC AAGCTGCTGC CGATCTATCT GAAGGAATCT GCTGCCGGTA CAGCCACGGC TGATGCCGGC CAACGCTTCC TTGAGCCCGG TCTGTTCCTG ACCAATCCGC TGGACCAGAT CTCTCTGGGT ATGGCGCTGG TGCTGGGTAC TGCCGGTATG CCGCACATCC TGATGCGTTT CTTCACGGTC CCGACTGCAC AGGCTGCCCG TAAATCGGTT ATCGTGGCGA TGTTCATCAT CGGTTCTTTC TACATCCTGA CCACCCTGCT GGGCTTTGGT GCTGCTATCC ATCTCTCCCC GCAGGGCATC AAGCAGGTTG ACGCAGGCGG CAACATGGCT GCCATGATGC TGGCAAAGCA GATGGGTGGC GAGTTCTCCC CGTTCCTGGG TGACCTGTTG CTGGCCTTCC TCTGTGCCGT TGCCTTTGCA ACCATCCTGG CTGTTGTATC CGGTCTGGTT CTGGCAGCCT CCGCTGCCAT CGCCCACGAC ATCTATGTGA ACGTGATCAA GGACGGCCAC GCTGACCAGA AGGAGCAGGT CTTTGCAGCC CGTGCCACTT CCTTTATCGT TGGCGCTTGC GGTATCGTAA TCGGTATTGC TGCCGAGAAA CAGAACGTTG CCCACCTGGT GGCCCTGGCC TTTGCCGTTG CCTCCTCCGG TAACCTGCCG GTTGTGGTGA TGTCCCTGTT CTGGAAGAAG TTCAACACCG CCGGTGTTAT TGCCGGTCTG GTGGTTGGTA CCATCGCCTC TGTTGGTCTG GTTATGGTTT CACCCAACAT GACCTATCCC GAGGTCGTTG CTAAAAATGC CAAGGCAGCC TACACCAAGC TTGAGAAAGA GATTGCAGAC GGCAAGGTCA AGCCTGAAGC AATGGAGAAG ACCCTCAAGA CCATCGAGGC CAAGAAGGCA GAAGAGGCCA AAAACCTCGG CGGCAAGTCC ATGCTGGGCC TGTCCAAGCC GCTCTTTACC CTCAAGAACC CCGGTATCCT CTCTATCCCG CTGGGCTTCA TCGCTGCCAT CCTGGCAACC TTGATGTTCC CCTGCAAAAA GGCAGAGGAG ATGTGGGACG AGATCTATGT GCGCCAGAAC ACCGGCATCG GCATGGCCAA GGCCATCGAC CACTAA
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Protein sequence | MKRLLVAIGC VLSLSFAAYA EPAKAPAAPE AKPAVAAPAA TVALAADAAK VAAPAPAKPA EEKKASLKAN PKVTIPIFLA IIGATMAVVV WSAKQTKSAA DFYTAGGGIT GTQNGWAIAG DYMSAASFLG ISGMISLYGY DGFMYSVGWL VAYITVLLIV AEPCRNAGKY TLGDILSFRT SPKPVRAVAA ISTVSVSTFY LTAQMVGAGK LMQLLLGVPY KTAIIGVGIL MVGYVVFGGM TATTWVQIIK AGLLMTGAAL LSILVSIKSG FSPLQFFTDI ATNQNIIDHV KLLPIYLKES AAGTATADAG QRFLEPGLFL TNPLDQISLG MALVLGTAGM PHILMRFFTV PTAQAARKSV IVAMFIIGSF YILTTLLGFG AAIHLSPQGI KQVDAGGNMA AMMLAKQMGG EFSPFLGDLL LAFLCAVAFA TILAVVSGLV LAASAAIAHD IYVNVIKDGH ADQKEQVFAA RATSFIVGAC GIVIGIAAEK QNVAHLVALA FAVASSGNLP VVVMSLFWKK FNTAGVIAGL VVGTIASVGL VMVSPNMTYP EVVAKNAKAA YTKLEKEIAD GKVKPEAMEK TLKTIEAKKA EEAKNLGGKS MLGLSKPLFT LKNPGILSIP LGFIAAILAT LMFPCKKAEE MWDEIYVRQN TGIGMAKAID H
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