Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1397 |
Symbol | |
ID | 6366295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1436458 |
End bp | 1438455 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642676799 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_001951638 |
Protein GI | 189424461 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000364072 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAC TGTTAGTTGC TATCGGTTGT GTACTCTCCC TGAGCTTCGC CGCCTATGCC GAGCCTGCCA AGGCTCCGGC CGCTCCTGAG GCCAAGCCTG CGGTTGCCGC TCCTGCTGCT GCTCCGGCAG CTACTGTAGC CCCGGCTGCA GATGCTGCCA AGCAAGCTGC AGCTCCGGCG CCAGCTCCTG TAAAAGATGC CAAGGCTGGT CTGAAGGCCA ACCCGGTTGT GACCATTCCG ATCTTCCTGT TGATCATCGG CGCAACCATG GCGGTTGTGG TCTGGTCAGC CAAGAAGACC AAGTCGGCTG CCGACTTCTA CACCGCCGGT GGTGGTATCA CCGGTACCCA GAACGGTTGG GCGATTGCCG GTGACTATAT GTCGGCTGCC TCATTCCTGG GTATTTCCGG CATGATCTCC CTGTACGGCT ATGACGGCTT CATGTACTCG GTGGGCTGGC TGGTTGCCTA CATCACCGTG CTCTTGATCG TTGCCGAGCC TTGCCGTAAC GCCGGTAAGT ACACCCTGGG TGACATCCTT TCCTTCCGTA CGTCACCCAA GCCGGTCCGT GCCGTTGCTG CCATCTCCAC TGTGTCGGTT TCCACCTTCT ACCTGACCGC TCAGATGGTT GGTGCCGGTA AACTGATGCA GCTGCTGCTG GGGGTACCGT ACAAGACCGC TATCATCGGC GTTGGTATTC TGATGGTTGG CTACGTTGTG TTCGGTGGTA TGACCGCCAC CACCTGGGTT CAGATCATCA AGGCCGGCCT GCTGATGACC GGTGCTGCCC TGCTGTCGAT CATGGTTTCG ATCAAGTCCG GTTTTAACCC GTTCCAGTTC TTCAGTGACA TCGCCACCAG TCAGAATATC ATTGACCATG TCAAGCTGCT GCCGATCTAC CTGAAAGAGG TCAAGGCCGG CACGGCAACC ATGGATGCCG GCCAACGCTT CCTTGAGCCC GGTCTGTTCC TGACCAATCC GCTGGACCAG ATCTCCCTGG GTATGGCGCT GGTGCTGGGT ACTGCCGGTA TGCCGCACAT CCTGATGCGT TTCTTCACGG TCCCGACTGC ACAGGCTGCC CGTAAATCGG TTATCGTGGC GATGTTCATC ATCGGTTCTT TCTACATCCT GACCACCCTG CTGGGCTTTG GTGCTGCCAT TCACGTAACT CCACAGGGCA TCAAGTCTGT TGACGCAGGC GGCAACATGG CTGCCATGAT GCTGGCAAAG CAGCTCGGCT CCGAGTTCTC GCCGTTCATC GGTGACCTGT TGCTGGCCTT CCTCTGTGCC GTTGCCTTTG CAACCATCCT GGCTGTTGTA TCCGGTCTGG TTCTGGCAGC CTCCGCTGCC ATCGCCCACG ACATCTATGT GAACGTGATC AAGGACGGCC ACGCCGACCA GTCCGAGCAG GTCTTTGCAG CCCGTACCAC CTCCTTCATC GTTGGTGCTG TTGGTATCAT CATCGGTATT GCTGCCGAGA AGCAGAACGT TGCCCACCTG GTGGCCCTGG CCTTTGCCGT TGCCTCCTCC GGTAACCTGC CGGTTGTGGT GATGTCCCTG TTCTGGAAGA AGTTCAACAC CGCCGGTGTT ATTGCCGGTC TGGTGGTTGG TACCGTCGCC TCCATTGGTC TGGTAATGAT CTCCCCCAAC ATGACCTATC CCGAGGTCGT TGCCAACAAC GCTAAGTTGG CCTACAGCAA ACTGGAGAAA GAGATCGCAG ACGGCAAGGT CAAACCTGAG GCAATGGAGA AGACCCTCAA GACCATCGAG ACCAAGAAGG CTGAAGAGGC TAAAAACCGT GGCGGCAAGT CCATGCTGGG CCTTGAGAAG CCGCTGTTCA CTCTGAAGAA CCCCGGTATC GTTTCTATCC CGCTGGGCTT CATCGCTGCC ATCCTGGCAA CCCTGGCTTT CCCGAGCAAG AAGGCAGAGG AGATGTGGGA CGAGATCTAT GTCCGGCAGA ATACCGGTCT GGGTATGGCA AAGGCTGTCG ATCACTAA
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Protein sequence | MKRLLVAIGC VLSLSFAAYA EPAKAPAAPE AKPAVAAPAA APAATVAPAA DAAKQAAAPA PAPVKDAKAG LKANPVVTIP IFLLIIGATM AVVVWSAKKT KSAADFYTAG GGITGTQNGW AIAGDYMSAA SFLGISGMIS LYGYDGFMYS VGWLVAYITV LLIVAEPCRN AGKYTLGDIL SFRTSPKPVR AVAAISTVSV STFYLTAQMV GAGKLMQLLL GVPYKTAIIG VGILMVGYVV FGGMTATTWV QIIKAGLLMT GAALLSIMVS IKSGFNPFQF FSDIATSQNI IDHVKLLPIY LKEVKAGTAT MDAGQRFLEP GLFLTNPLDQ ISLGMALVLG TAGMPHILMR FFTVPTAQAA RKSVIVAMFI IGSFYILTTL LGFGAAIHVT PQGIKSVDAG GNMAAMMLAK QLGSEFSPFI GDLLLAFLCA VAFATILAVV SGLVLAASAA IAHDIYVNVI KDGHADQSEQ VFAARTTSFI VGAVGIIIGI AAEKQNVAHL VALAFAVASS GNLPVVVMSL FWKKFNTAGV IAGLVVGTVA SIGLVMISPN MTYPEVVANN AKLAYSKLEK EIADGKVKPE AMEKTLKTIE TKKAEEAKNR GGKSMLGLEK PLFTLKNPGI VSIPLGFIAA ILATLAFPSK KAEEMWDEIY VRQNTGLGMA KAVDH
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