| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1392 |
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| Symbol | |
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| ID | 6367842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1428949 |
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| End bp | 1432098 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642676794 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001951633 |
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| Protein GI | 189424456 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGCT TTTTTATTGA TCGCCCTGTC TTTGCTGCAG TGATTGCCAT CATCATTACC
CTGGGGGGGC TGGTTGCCCT CAAGGTTACG CCGATTGCTC AGTACCCTAA TATTGCCCCT
CCCACGGTGC AGGTCTCGGC CTTCTATCCC GGCGCCACTG CCGAGGTGAT CGCCAATACG
GTTGCTGCGC CGATCGAGCA GCAGGTCAAC GGCGTGGATG GTATGAGCTA CATGTCCTCC
ACCAGCGCCT CATCCGGTAA CATGAGCCTG ACCGTTACCT TTGAGCCGGG CACTGACCCG
GATATGGCCC AGGTCAACGT ACAGAACCGG GTCAGCCAGG CCTCTGCCCT GTTACCGGAC
GTGGTCAGCC AACAGGGGGT AACGGTCCAG AAACGCTCCC AGTCCTTTAT GATGGTGATC
AGCGTCTATT CCCCCGATGA CCGCTATGAT CCGGTTTACC TGGGTAACTA TGCCAACCTG
TATATCCTGG ATGCCATCAA GCGGATTCCC GGCGCCAACC TTTCTTCCAT GTTTCCCCTG
CCGGATGTGG CGATGCGGAT CTGGCTCAAG CCTGATCGCC TGGCCCAGCT GGGGCTGACA
GCCCAGGATA TTGCCACTGC CATCCAGCAG CAGAACAAGG CCTTTGGTGT CGGTTCCATC
GGCCAGTCGC CTTCGCCCAG GGGAACCCAA CAGACCTTTG TGGTCACCAC CAAGGGGATG
CTGTCTGACC CTGCCGAGTT TGAGAACATC ATTATCCGTG CCGCGTCGGC AGGTTCTGCA
CTGGTACGGC TGAAGGATGT GGCCCGTGCC GAGCTGGGAG GCAAGGATTA CTCCGTCACC
ACCAAGGTCA ACGGTAAAAA GTCAGTTGCC ATTGTGGTCT ATCAGCAGCC CGGTGCCAAT
GCCATTGAAA CCTCCAAGCA GATCAACAAA CTGCTGGCAG GCCTGAAAAA GAGCTTCCCC
CAGGGGATGG AGTACAAGGT GGTGCTGGAT ACCAGTGAGT TTACCGATGC CTCCATTGAA
AAAGTGGTGC ATACCTTCTT TGAGGCGGTG GTGCTGGTGG TGCTGGTGGT GTTTCTGTTT
CTGCAGAGTT TCCGGGCCAC CTTTATTCCT ATCCTGGCGG TGCCGATTGC CATTGTCGGT
ACCTATATGG GGATACTGGC GCTGGGGTTC TCCACCAATA TGCTGACCCT GTTCGGCATG
ATCCTGGCCA TCGGCCTGGT GGTGGACGAT GCCATCATTG TGGTGGAAAA CGTTGAACAT
AACATGGCCA CCTATGGCAT GACCCCGATG GAGGCTGCCA AAAAGGCGAT GTCAGAACTG
ACCGGCGCCT TGATCGCCAT TGTACTGGTG CTGGGGTCGG TCTTTCTGCC GGTGGCCTTT
CTAGGGGGGA TGACCGGTAC GCTCTACAAG CAGTTTGCGG TTACCATCGC CATCTCCATG
GTACTTTCCG GCGTGGTGGC GCTGACCCTT TCACCAGCCC TGGCTGCACG GATTCTGAAG
CCGGGGCATG GCGAGAAGAA GGGCTTCTTC AAGTGGTTTG AAGATCGCTT TAATCGCCTG
ACCGAACTGT ACACCAGCGG GGTACGCTGG CTGATCAATC ACCGCAGCAT CGGCCTGGGG
CTGTTCTGTG GTGTGCTGGC GTTGGTACTG CTGCTGTTCA GGATTGTTCC GGGCAGTTTT
GTGCCGGAGG AGGATCAGGG CTATCTGTTT GTAGGCACCA TGATGCCTGA TGCCAGCAGC
CTTGAACGGA CCACGGCGGT CAGTGACCGG GCAGTGCAGT TTGCCCAGAC CAACAAGGCC
ATGGGGGACA TCACCCAGAT TAACGGCTAC AGCCTGATTG ACGGTAGCGT CAAGGATAAT
GCCGGTCTGT TGTTTGCCGC GCTTAAGCCG TATAGTGAGC GGGAGGGGAA GGGAACTGAC
GCCGCAAGCG TGCAAAAGGA TCTTGGCCGC AAACTGCATG GTATCAAAGA AGGGGTGGTC
TTTCCGATCA ATCCACCCTC CATTCCCGGT CTGGGCAGTA CCGGCGGTTT TGAGTTCTAT
ATCCAGAGCA AGGGGGGCGG CTCTCCCCAG GAACTGGAGA AAATCACCAA GCAGTTTGTT
GCCGAGACCC GTAAGCGTAA AGAACTGTCC GGTGTCTCCA CTACCTTCTC TGCCAGCCAG
CAGCAGCTCT ATCTTGATGT TAACCGGGCA CAGGCAGAAT TGCTGGGTGT GCCGGTATCC
ACGGTCTTTG AGACCCTGCA GTCATACTTC GGTTCTGCCT ACGTGGGGCA GTTTCTGCAG
TATGGCCGGA TCTGGCAGGT CATCCAGCAA TCTGAACCTG ACTACCGTGA TAAACCCAAT
GACCTGACCC AGATCTATGT CCGTTCAAGC AGTGGCAGTA TGATCCCGCT TTCCGCCATG
GCAACCATCA GATATGTGGC TGGTCCCAGC CTGTTGCCCC GCTTTAACGG CTTCCCGGCC
TCCAAGCTGA ACGGCAGCCA GGCATCAGGT TACAGCTCCG GTCAGGCCAT CAGCGCCATG
GAGGAGGTGG CCGGGAAGGT GCTGCCGGAG GGCTATGGCT ATTCCTGGTC AGGTCAGGCC
TTTGAAGAGA AAAAGGCCGG TAATACCTCA ACCATGGCCT TTGCATTTGG TCTGATCATG
GTCTTTCTGA TTCTGGCTGC CCAGTATGAG AAATGGTCCC TGCCGGTGGG GGTGGTGCTG
TCGGTCCCCT TTGCCCTTTG CGGTGCCCTG CTGTTTACCT GGGTACGTGG CCTGGAAAAT
GATGTCTACT TTCAGGTCGG CCTGGTGACC CTGGTGGGGC TGTCCGCCAA AAACGCCATC
CTGATCATAG AATTTGCGGC TGATAACCTG AAAAAGGGGA TGGAGCCGGC TGAAGCGGCC
ATTGAAGCAG CCCGGTTGCG TCTGCGCCCG ATTGTGATGA CCTCCCTGGC CTTTATTCTT
GGCTGTGTAC CGATGGCCAT AGCCCACGGT GCCGGTGCAA ACAGTCTGCG TGCCATCGGG
ACCGGTGTGA TCGGCGGCAT GCTGGCCTCC ACCCTGGTGG CCTCCTTCTT TGTGCCGCTC
TTCTTTGTGC TGCTTGAGTC AGCCAGCGGT ATCTTCAGCC GTAAAAAGGG TGTCAAGGCC
CTGCAGGAAG GGGGCAACGA CCATGCGTAA
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| Protein sequence | MGSFFIDRPV FAAVIAIIIT LGGLVALKVT PIAQYPNIAP PTVQVSAFYP GATAEVIANT
VAAPIEQQVN GVDGMSYMSS TSASSGNMSL TVTFEPGTDP DMAQVNVQNR VSQASALLPD
VVSQQGVTVQ KRSQSFMMVI SVYSPDDRYD PVYLGNYANL YILDAIKRIP GANLSSMFPL
PDVAMRIWLK PDRLAQLGLT AQDIATAIQQ QNKAFGVGSI GQSPSPRGTQ QTFVVTTKGM
LSDPAEFENI IIRAASAGSA LVRLKDVARA ELGGKDYSVT TKVNGKKSVA IVVYQQPGAN
AIETSKQINK LLAGLKKSFP QGMEYKVVLD TSEFTDASIE KVVHTFFEAV VLVVLVVFLF
LQSFRATFIP ILAVPIAIVG TYMGILALGF STNMLTLFGM ILAIGLVVDD AIIVVENVEH
NMATYGMTPM EAAKKAMSEL TGALIAIVLV LGSVFLPVAF LGGMTGTLYK QFAVTIAISM
VLSGVVALTL SPALAARILK PGHGEKKGFF KWFEDRFNRL TELYTSGVRW LINHRSIGLG
LFCGVLALVL LLFRIVPGSF VPEEDQGYLF VGTMMPDASS LERTTAVSDR AVQFAQTNKA
MGDITQINGY SLIDGSVKDN AGLLFAALKP YSEREGKGTD AASVQKDLGR KLHGIKEGVV
FPINPPSIPG LGSTGGFEFY IQSKGGGSPQ ELEKITKQFV AETRKRKELS GVSTTFSASQ
QQLYLDVNRA QAELLGVPVS TVFETLQSYF GSAYVGQFLQ YGRIWQVIQQ SEPDYRDKPN
DLTQIYVRSS SGSMIPLSAM ATIRYVAGPS LLPRFNGFPA SKLNGSQASG YSSGQAISAM
EEVAGKVLPE GYGYSWSGQA FEEKKAGNTS TMAFAFGLIM VFLILAAQYE KWSLPVGVVL
SVPFALCGAL LFTWVRGLEN DVYFQVGLVT LVGLSAKNAI LIIEFAADNL KKGMEPAEAA
IEAARLRLRP IVMTSLAFIL GCVPMAIAHG AGANSLRAIG TGVIGGMLAS TLVASFFVPL
FFVLLESASG IFSRKKGVKA LQEGGNDHA
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